PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM86624.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB

Protein Properties

Length: 1039aa MW: 114103 Da PI: 4.7983

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM86624.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	57.9	2.4e-18	36	82	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEde+l +av+++ g++Wk+Ia+++ Rt+ qc +rwqk+l OWM86624.1 36 KGQWTAEEDEILRKAVERFKGKNWKKIAECFK-DRTDVQCLHRWQKVL 82 799**************************9.**********986 PP
2	Myb_DNA-binding	63.2	5.1e-20	88	134	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEd +++++v+++G++ W+tIa++++ gR +kqc++rw+++l OWM86624.1 88 KGPWSKEEDSIIIELVNKYGPKKWSTIAQHLP-GRIGKQCRERWHNHL 134 79****************************.***********97 PP
3	Myb_DNA-binding	48.6	1.9e-15	140	182	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 + +WT+eE++ l++a++ +G++ W+ + ++ gRt++ +k++w+ OWM86624.1 140 KEAWTQEEELALIRAHQIYGNR-WAELTKFLP-GRTDNAIKNHWN 182 579*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1039 aa Download sequence
MESESASTPS DGFIGVSQKP RPLHGRTSGP TRRSTKGQWT AEEDEILRKA VERFKGKNWK 60 KIAECFKDRT DVQCLHRWQK VLNPELVKGP WSKEEDSIII ELVNKYGPKK WSTIAQHLPG 120 RIGKQCRERW HNHLNPAINK EAWTQEEELA LIRAHQIYGN RWAELTKFLP GRTDNAIKNH 180 WNSSVKKKLD SYIASGLLSQ FPALPHPAGY QNQLAPSSSR MQSSGDDTAP KGATEAEEIS 240 ECSQGSTMVV CSQSASDMVL HGREDLQYLE EPALGNEPNS SPASSSGRYY SIEDVTLSIP 300 DICPETAHSS DLHIQFPQGI ETCADQTYQF NSDNLPNISL LELGRESSAF QSQSLGADGD 360 HDRLNAAFQP STSHMVASSL GALGIDSDQL HHILTSDEEC CRILFSEAVG DGCFGSNPKG 420 SDSSGCGRPD ISSNQALDSQ ISVDSRALSQ QYDCPRSDLW VTSSGQSFKP VPPLSNDDGN 480 INFDKKHNQL PDVPGAAQED FVPHDGFIYT NNSANSPCDD ATELGSAELL DLPKDQSKLV 540 PVDTFGSTSN APQTLKEDSN IKTEKEEPGS LCYEPPRFPS LDIPFLSCDL VQSSNDMQMD 600 YSPLGIRQLM MSSMNCISPF RLWDSPTRDS SPDAVLKSAA KTFTNTPSIL RKRHRDLLSP 660 LSDRRIDKKL ETEITANLSR EFSRLDVIFD EKTTEKACPS SPSSSQKMNS GFLNDDDKEN 720 LGIDVQMSEN KGDQTAISGE CDQIKDNERS TFEDEKQQVV DPLSECKHKA EADASPKPMQ 780 LPEVLSERDL NDLLLFSPDP TSQKTDKASA PTAGCPRKPC YEVTPTCLEP IDSSSGNSCL 840 PITSPPVLKT SGSSQKVTST SKLCLHTSTP LQVVVNNSSN ESLSIFGGTP FRRSIESPSA 900 WKSPWFMNSF LPGPRIETEI TIEDIGYFMS PGDRSYDALG LMKHVSEHSA SVFANAEEVL 960 GNDTPKQKSI DVGNPDQENQ NADQPTETSS NMASNVLIER RTLDFSECGT PGKSKEKGKS 1020 STAMMSFSSP SSYLLKGCR

Sequence ? help Back to Top

Protein Sequence Length: 1039 aa Download sequence

MESESASTPS DGFIGVSQKP RPLHGRTSGP TRRSTKGQWT AEEDEILRKA VERFKGKNWK  60
KIAECFKDRT DVQCLHRWQK VLNPELVKGP WSKEEDSIII ELVNKYGPKK WSTIAQHLPG  120
RIGKQCRERW HNHLNPAINK EAWTQEEELA LIRAHQIYGN RWAELTKFLP GRTDNAIKNH  180
WNSSVKKKLD SYIASGLLSQ FPALPHPAGY QNQLAPSSSR MQSSGDDTAP KGATEAEEIS  240
ECSQGSTMVV CSQSASDMVL HGREDLQYLE EPALGNEPNS SPASSSGRYY SIEDVTLSIP  300
DICPETAHSS DLHIQFPQGI ETCADQTYQF NSDNLPNISL LELGRESSAF QSQSLGADGD  360
HDRLNAAFQP STSHMVASSL GALGIDSDQL HHILTSDEEC CRILFSEAVG DGCFGSNPKG  420
SDSSGCGRPD ISSNQALDSQ ISVDSRALSQ QYDCPRSDLW VTSSGQSFKP VPPLSNDDGN  480
INFDKKHNQL PDVPGAAQED FVPHDGFIYT NNSANSPCDD ATELGSAELL DLPKDQSKLV  540
PVDTFGSTSN APQTLKEDSN IKTEKEEPGS LCYEPPRFPS LDIPFLSCDL VQSSNDMQMD  600
YSPLGIRQLM MSSMNCISPF RLWDSPTRDS SPDAVLKSAA KTFTNTPSIL RKRHRDLLSP  660
LSDRRIDKKL ETEITANLSR EFSRLDVIFD EKTTEKACPS SPSSSQKMNS GFLNDDDKEN  720
LGIDVQMSEN KGDQTAISGE CDQIKDNERS TFEDEKQQVV DPLSECKHKA EADASPKPMQ  780
LPEVLSERDL NDLLLFSPDP TSQKTDKASA PTAGCPRKPC YEVTPTCLEP IDSSSGNSCL  840
PITSPPVLKT SGSSQKVTST SKLCLHTSTP LQVVVNNSSN ESLSIFGGTP FRRSIESPSA  900
WKSPWFMNSF LPGPRIETEI TIEDIGYFMS PGDRSYDALG LMKHVSEHSA SVFANAEEVL  960
GNDTPKQKSI DVGNPDQENQ NADQPTETSS NMASNVLIER RTLDFSECGT PGKSKEKGKS  1020
STAMMSFSSP SSYLLKGCR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G11510.1	0.0	MYB family protein