PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM86577.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

TALE

Protein Properties

Length: 479aa MW: 53814.6 Da PI: 6.737

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM86577.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	25.7	1.9e-08	396	434	18	54
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +F++ ++yp+ +e+ LA k gLt +qV++WF N R + OWM86577.1 396 MFQNflHPYPKDAEKHLLALKSGLTRSQVSNWFINARVR 434 5887779******************************88 PP
2	BELL	82.8	4.3e-27	265	333	3	72
BELL 3 qelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +e++ +k++Ll+ll+ Vd+rY+q+ ++++tvis+F+a+++l++ k++t++Al++iS +++L+++i+++i OWM86577.1 265 REIEGRKTQLLNLLQAVDDRYNQCLDEIHTVISAFHAATELDP-KMHTRFALQTISILYKNLRERISSHI 333 79999************************************.*********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 479 aa Download sequence
MAGFPVTPTL QGQPISDLQG QFHVNPDLSI SSLGRNFIGN SSHRSSVQEF PADMPIPASA 60 LATFLNARHE NSSLNLIEAS SSSFGTCGYE DIAGPSKWDF YKNNVPAPEL GTRACTFPGN 120 LDPNGWWVSS EGMNIRPGNP YFSPNPTREL SLSLGTSQPS AISSANVMDQ QSEISNNEMV 180 DQTSCDSQDI SLQFRPYRPM QFWELISGSK YLGAIQEILA QVASYALENL DSVSYLSGGL 240 GAGISNTVSS SCQDVFMVEP VGKVREIEGR KTQLLNLLQA VDDRYNQCLD EIHTVISAFH 300 AATELDPKMH TRFALQTISI LYKNLRERIS SHILSMGERE CLDYLGGSSS ERERSLEASL 360 VQRQWALQQL KRKDHQLWRP QRGLPEKSVS VLRAWMFQNF LHPYPKDAEK HLLALKSGLT 420 RSQVSNWFIN ARVRLWKPMI EEMYAELNRR KAHRGDEEER AEIFNRSCSS ISSRRFRIN

Sequence ? help Back to Top

Protein Sequence Length: 479 aa Download sequence

MAGFPVTPTL QGQPISDLQG QFHVNPDLSI SSLGRNFIGN SSHRSSVQEF PADMPIPASA  60
LATFLNARHE NSSLNLIEAS SSSFGTCGYE DIAGPSKWDF YKNNVPAPEL GTRACTFPGN  120
LDPNGWWVSS EGMNIRPGNP YFSPNPTREL SLSLGTSQPS AISSANVMDQ QSEISNNEMV  180
DQTSCDSQDI SLQFRPYRPM QFWELISGSK YLGAIQEILA QVASYALENL DSVSYLSGGL  240
GAGISNTVSS SCQDVFMVEP VGKVREIEGR KTQLLNLLQA VDDRYNQCLD EIHTVISAFH  300
AATELDPKMH TRFALQTISI LYKNLRERIS SHILSMGERE CLDYLGGSSS ERERSLEASL  360
VQRQWALQQL KRKDHQLWRP QRGLPEKSVS VLRAWMFQNF LHPYPKDAEK HLLALKSGLT  420
RSQVSNWFIN ARVRLWKPMI EEMYAELNRR KAHRGDEEER AEIFNRSCSS ISSRRFRIN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32980.1	1e-103	TALE family protein