PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM86284.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

G2-like

Protein Properties

Length: 580aa MW: 64543.8 Da PI: 5.0234

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM86284.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	70	3.8e-22	217	270	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr++Wt+eLH++F a++ L G + A Pk+ile+m+v+ Lt +v+SHLQkY+ OWM86284.1 217 KPRIVWTSELHHKFTAALSTL-GDQYARPKSILEMMNVPNLTQRQVASHLQKYKA 270 79*****************.9999*************************85 PP
2	Myb_DNA-binding	35.9	1.8e-11	221	269	3	48
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT e++ ++ a lG ++k+I ++m+ ++t q+ s++qky+ OWM86284.1 221 VWTSELHHKFTAALSTLGDQyaRPKSILEMMNvPNLTQRQVASHLQKYK 269 6***************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 580 aa Download sequence
MSLIWDRDWD RTRHFKLVMA HLSMENPENL SFLRALAKEG IPLILISSNK NVTTAEKALA 60 EGACFFLENP IALSDLKYVL QHACHRTDNP IKEDCPVVMK RKRNTTEFSP PVKSSNISCN 120 ETLPDPNGKN KQIGMVIEGS RPRNGPEPLV DRPEAPKGEL SNYPKAMKRP LDNDKDRGLP 180 LNKKLNVGPE KVHSGNQKFS GGVKGNGKAG GGASEKKPRI VWTSELHHKF TAALSTLGDQ 240 YARPKSILEM MNVPNLTQRQ VASHLQKYKA QVQRIGLAGT ADVASLNKQI DSYLMPNSFQ 300 WFEKNGTLGR ESFCFATRAN QIQYLAISDP FGIQEFNQDS QKNNCFSEPM EPSILQHPPS 360 CIKDPAPAPN HGVTSLSSGD VSEKQSVSVN EGSKDQSPEL DLLMTSSPVA VEEDMDYFLD 420 LASIFSPMHE LPAESNMDFE PLCGFSQVEP EQVSTISTEK STQNVPEFLP DLAYGFEPFK 480 EPLFKTDLKG QTSEGYFMNS SSLTNSSDFL MPSKDVNPTE NTSGFDELLK MMEEEPQDLT 540 GPESKVKLDD VNQYSEWLEE LLQAPTEVES NLFPKHPSKL

Sequence ? help Back to Top

Protein Sequence Length: 580 aa Download sequence

MSLIWDRDWD RTRHFKLVMA HLSMENPENL SFLRALAKEG IPLILISSNK NVTTAEKALA  60
EGACFFLENP IALSDLKYVL QHACHRTDNP IKEDCPVVMK RKRNTTEFSP PVKSSNISCN  120
ETLPDPNGKN KQIGMVIEGS RPRNGPEPLV DRPEAPKGEL SNYPKAMKRP LDNDKDRGLP  180
LNKKLNVGPE KVHSGNQKFS GGVKGNGKAG GGASEKKPRI VWTSELHHKF TAALSTLGDQ  240
YARPKSILEM MNVPNLTQRQ VASHLQKYKA QVQRIGLAGT ADVASLNKQI DSYLMPNSFQ  300
WFEKNGTLGR ESFCFATRAN QIQYLAISDP FGIQEFNQDS QKNNCFSEPM EPSILQHPPS  360
CIKDPAPAPN HGVTSLSSGD VSEKQSVSVN EGSKDQSPEL DLLMTSSPVA VEEDMDYFLD  420
LASIFSPMHE LPAESNMDFE PLCGFSQVEP EQVSTISTEK STQNVPEFLP DLAYGFEPFK  480
EPLFKTDLKG QTSEGYFMNS SSLTNSSDFL MPSKDVNPTE NTSGFDELLK MMEEEPQDLT  540
GPESKVKLDD VNQYSEWLEE LLQAPTEVES NLFPKHPSKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G16857.2	2e-19	ARR-B family protein