PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM86087.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MYB | ||||||||
Protein Properties | Length: 395aa MW: 43714.3 Da PI: 5.105 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.5 | 2e-15 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rgrW +eEde+l ++++ +G g+W++ ++ g+ R++k+c++rw +yl OWM86087.1 14 RGRWMAEEDEILTNYIQAHGEGSWRSLPKNAGLLRCGKSCRLRWVNYL 61 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 51 | 3.3e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ + eE+++++++++ lG++ W++Ia+ ++ gRt++++k++w+++l OWM86087.1 67 RGNISSEEEKIIINLHASLGNR-WSLIANQLP-GRTDNEIKNYWNSHL 112 7899******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 395 aa Download sequence |
MGRTPCCEKV GLKRGRWMAE EDEILTNYIQ AHGEGSWRSL PKNAGLLRCG KSCRLRWVNY 60 LKTDLKRGNI SSEEEKIIIN LHASLGNRWS LIANQLPGRT DNEIKNYWNS HLSRKVDTFR 120 RPPAPDPTLQ AIMERAKAGL NPSKKKGGRT SGGEGKSNNH TNHASQKGVG ISSRGNRPSD 180 DNKRESRISD PSKEGKRVTL PTPSLGSEIG SMSGESNNNS TLSYENGTGG SSNSITGDSM 240 MCLRVEDSPE VLGPFEGIDG DMLSSINEIL DSNGLLMESF ATRKEDVFNF YNAPASPTSY 300 TISTAGNGEA RNNVSSSNVS AAFNSSFDDI ESISNWDWED LVQGNDKGVA ERNDCQELFS 360 WLWEGDNDMN QYERDNMGLL MDFEKQNDMG SWLIF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47460.1 | 1e-65 | MYB family protein |