PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM85633.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GRAS
Protein Properties Length: 541aa    MW: 60900.8 Da    PI: 5.9802
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM85633.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS384.61.2e-1171685412374
        GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                 ++lL  cAe +s++d+ +a +++++l + +s  g p++Rl ay++e+L+arl +s+s +y++l++ e +   s e +++++++++++P+ kf++  aN 
  OWM85633.1 168 KQLLELCAEKISESDTPMAATMMEELDKKVSVLGGPIERLGAYLLEGLKARLESSGSLIYRKLKCVEPT---SNELMSYMSILYQICPYWKFAYESANV 263
                 788999**************************************************************9...89999999******************* PP

        GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                 +I ea+ +e r+HiiDf+i qG+QW+ +++ L +R ++ ps+RiTgv++++s   +   l  +g++L k Ae++g++fef+   a + +++++e+L ++
  OWM85633.1 264 TIWEAMRNEPRIHIIDFQIAQGTQWVFFMEGLKARGGQLPSIRITGVDDSQSAhaRGGGLDLVGRKLVKAAESCGIQFEFHK-SAMSGHEVQYENLGLH 361
                 *************************************************9988889999***********************.899************* PP

        GRAS 198 pgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres....eerikvErellgr 292
                 +gEa+aVn+ + lh+++desvs+e++rd++L+lvkslsPkvv++veqe+++n+++F+ rf e l+yy a+f+s++a+ ++es    ++ri+ E+ +++r
  OWM85633.1 362 HGEAIAVNFPYVLHHMPDESVSVENHRDRLLRLVKSLSPKVVTLVEQESNTNTSPFVPRFREMLDYYLAMFESIDAGSSQESsldsKKRISAEQNCVAR 460
                 **************************************************************************9998887778889************ PP

        GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                 +ivn++aceg +r+erhe l+kWr+r+++aGF++++ls ++++ ++ llr ++ + ++vee++g+l+l W +r +v+ SaWr
  OWM85633.1 461 DIVNMIACEGLDRVERHELLGKWRMRFSMAGFQQLRLSPFVTEAIRGLLRGYS-RNFKVEERDGALYLWWLNRCMVTSSAWR 541
                 *****************************************************.55*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 541 aa     Download sequence    
MQRFYYQPMQ GMEPYYSPPF QVIHNDATSS HETGSQGTKF SSQEQYFTLE SSPAASGFIG  60
YDSPSAISGL TSRSPFSTQG SQSFVSDPLH SSSDNLYGSP ISGSSVANED SEQWHKLKEL  120
ENLLLGPESD TSDSSNCCVT SGVNHHLNSY GRWNQAQMME IIPRLDLKQL LELCAEKISE  180
SDTPMAATMM EELDKKVSVL GGPIERLGAY LLEGLKARLE SSGSLIYRKL KCVEPTSNEL  240
MSYMSILYQI CPYWKFAYES ANVTIWEAMR NEPRIHIIDF QIAQGTQWVF FMEGLKARGG  300
QLPSIRITGV DDSQSAHARG GGLDLVGRKL VKAAESCGIQ FEFHKSAMSG HEVQYENLGL  360
HHGEAIAVNF PYVLHHMPDE SVSVENHRDR LLRLVKSLSP KVVTLVEQES NTNTSPFVPR  420
FREMLDYYLA MFESIDAGSS QESSLDSKKR ISAEQNCVAR DIVNMIACEG LDRVERHELL  480
GKWRMRFSMA GFQQLRLSPF VTEAIRGLLR GYSRNFKVEE RDGALYLWWL NRCMVTSSAW  540
R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17230.10.0GRAS family protein