PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM85444.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 339aa MW: 37552.4 Da PI: 8.5771

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM85444.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.4	4.7e-12	160	206	4	55
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++ ++f L ++P + kK++Ka++L A++Y+k Lq OWM85444.1 160 DHIMAERKRREKLSQRFVALSAIVPGL-----KKMDKASVLGDAIKYLKLLQ 206 699**********************.....9**************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 339 aa Download sequence
MVDYNNLQSY LSSGNNDPHS MRLNMENIQQ QHLFSQKTLA TCSASSNEGS RTDCFGRPAK 60 QLKTDNSWSS GTTADQQQLS PNPSPRPSHS SASSSHILTF GSTSLVPKDE AVSQGYMHFV 120 SLGTESTVYG EQKFAPTSVG NVQGTKRAYP TTRSPSSAQD HIMAERKRRE KLSQRFVALS 180 AIVPGLKKMD KASVLGDAIK YLKLLQERVK VLEEQTKKRT MESAVLVKRS QVSSEDDSSS 240 CNKNSDGQLD HMLPEIEARV SDKDVLIRIH VEECKGFVHK IMSEIENLHL CIVNSSAVPF 300 GTSNLDITII AKMEDEFCIT AKDLVRKLRA ASMKFFKDA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	165	170	ERKRRE
2	166	171	RKRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	5e-66	bHLH family protein