PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM85423.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family B3
Protein Properties Length: 274aa    MW: 31124.5 Da    PI: 6.6751
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM85423.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3491.1e-15176271198
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                 +f+v++++++ k+g + +p +f+ ++g+ k e+  ++l  + g sW vk+ +    ++ +l +GW +F++ ngL++gD++ F+l++r++  ++v++++
  OWM85423.1 176 WFQVEMTKSYVKNGSVAVPARFLVTNGIGKWEQ-LVKL-RRLGSSWLVKMHFYPDARSGYLCGGWIKFARVNGLQVGDICKFELTKRNSIVFNVTIVN 271
                 567777888888888***********8888774.5665.5699*******9999998988999*********************99888777887765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MGHYTSDTPE FLIVLLPDTF AAKKIEIPQH FVLEHAEHLA ELVTLKVPNG DLWTMLTENW  60
EGRVWLGRGW ENFIDYYSIL PEYYVQFRLE GTSTFGVVIL DQRASEIYYP IKTAVPNNGL  120
PKREEPDDDV SFQIVGDFTP APRRRFEAEC SNGGNDTAGR AREVPGAANL IGQCPWFQVE  180
MTKSYVKNGS VAVPARFLVT NGIGKWEQLV KLRRLGSSWL VKMHFYPDAR SGYLCGGWIK  240
FARVNGLQVG DICKFELTKR NSIVFNVTIV NRDN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.12e-19B3 family protein