PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM85186.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MYB | ||||||||
Protein Properties | Length: 279aa MW: 31666 Da PI: 8.485 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 52.3 | 1.3e-16 | 14 | 61 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT Ed ll+d+++ +G g+W++ +++ g+ R++k+c++rw +yl OWM85186.1 14 RGPWTLKEDNLLIDYIRTHGEGHWRSLPKKAGLLRCGKSCRLRWMNYL 61 89******************************99************97 PP | |||||||
2 | Myb_DNA-binding | 51.3 | 2.6e-16 | 67 | 112 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T++E++l+++++ +lG++ W++Ia +++ gRt++++k++w+++l OWM85186.1 67 RGNITADEEDLIIRLHSLLGNR-WSLIAGRLP-GRTDNEIKNYWNSHL 112 7999******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 279 aa Download sequence |
MGRAPCCLKV GLRRGPWTLK EDNLLIDYIR THGEGHWRSL PKKAGLLRCG KSCRLRWMNY 60 LRPDIKRGNI TADEEDLIIR LHSLLGNRWS LIAGRLPGRT DNEIKNYWNS HLSKRVNADK 120 PYRSPKTRND ATNITKRNTR SPKNAEEINM ITKIKVHQPK AVRLSFSPSS VLRNGRNSSY 180 DNCVGEMSAS GEGKCLVTNL ERAAEDVDAD NDQCENLMIC SGCNVPSSSG PWHDDVNHIL 240 LPGTPSNREM LEKIFEEYQE LLMAEDHVQL ESFVDSLLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49330.1 | 7e-66 | MYB family protein |