PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM85044.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family Trihelix
Protein Properties Length: 344aa    MW: 39699.2 Da    PI: 9.0829
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM85044.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix104.86.4e-33187272187
    trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                 rW+k ev aLi++++ ++++++++  ++plW+e+s+ mr+ g+e+s+k+Ckekwen+nk++kk+ke++k+r +++s+tcpyf+ql+a
  OWM85044.1 187 RWPKAEVEALIKIKTGLDDKYQESGPRGPLWDEISASMRALGYEKSSKRCKEKWENINKYFKKVKESNKRR-PKDSKTCPYFHQLDA 272
                 8********************************************************************97.999**********85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MATNRSAKKC KEKFENHVRP ILVTAMPKPQ TRSLPGMSRY NSTVVPSSST YSDERPGVGS  60
RNREWKDFLG RIMDEVIKKQ EEMQKQLLEA IERIERQRAD REEAWRMQEM IRINKEREIL  120
AQERSALAAK DGLLMSFLEK LAKQCNLQVG QVQVEQISLP PHGPVEPSPS PAARNDGIRC  180
RLTGSSRWPK AEVEALIKIK TGLDDKYQES GPRGPLWDEI SASMRALGYE KSSKRCKEKW  240
ENINKYFKKV KESNKRRPKD SKTCPYFHQL DALYRTKKKV SYSTSDHVIP LMNSMVPLMV  300
RPERQWPPNE DVLQTGLERE NSIETDHAEE DNTEEGEEPT TEMP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76890.22e-71Trihelix family protein