PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM84958.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

MYB_related

Protein Properties

Length: 398aa MW: 44179.8 Da PI: 8.3757

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM84958.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.5	1.2e-16	75	119	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r rWT+eE++++++a k++G W++I +++g ++t+ q++s+ qk+ OWM84958.1 75 RERWTEEEHKKFLEALKLYGRA-WRRIEEHVG-TKTAVQIRSHAQKF 119 78****************88.*****.**********98 PP

Sequence ? help Back to Top
Protein Sequence Length: 398 aa Download sequence
MASTVAYSYQ TYLYDCGDDQ GGGSRPNPIL TGRNELSLGA SLRSLNTAIQ LKEQISCGAD 60 YSPKVRKPYT ITKQRERWTE EEHKKFLEAL KLYGRAWRRI EEHVGTKTAV QIRSHAQKFF 120 SKVVRESSGG SIELIEIPPP RPKRKPAHPY PRKLMDPLTN TELSKEDQQR RSPSPNSSVS 180 EREQHSPTSV LSAVGSASGT PSPIEEIGSP SPSAVTEPVA VASVLNEKLE LFPSLRETSK 240 DEAEEASACA QSFKLFGALL PVSNIEQSAS TIGDMNERKP LEMSPWLTLG SQNSRTRPFM 300 QGDSPDLADT KNGEVPNSRL WTNLKTQSGN DEGELNLGWN LRSEKPGCVP GSRFGVGRRE 360 DCMKGFVPYK RFMAEKRSEC AMLCGEDSQE KQRIRLCL

Sequence ? help Back to Top

Protein Sequence Length: 398 aa Download sequence

MASTVAYSYQ TYLYDCGDDQ GGGSRPNPIL TGRNELSLGA SLRSLNTAIQ LKEQISCGAD  60
YSPKVRKPYT ITKQRERWTE EEHKKFLEAL KLYGRAWRRI EEHVGTKTAV QIRSHAQKFF  120
SKVVRESSGG SIELIEIPPP RPKRKPAHPY PRKLMDPLTN TELSKEDQQR RSPSPNSSVS  180
EREQHSPTSV LSAVGSASGT PSPIEEIGSP SPSAVTEPVA VASVLNEKLE LFPSLRETSK  240
DEAEEASACA QSFKLFGALL PVSNIEQSAS TIGDMNERKP LEMSPWLTLG SQNSRTRPFM  300
QGDSPDLADT KNGEVPNSRL WTNLKTQSGN DEGELNLGWN LRSEKPGCVP GSRFGVGRRE  360
DCMKGFVPYK RFMAEKRSEC AMLCGEDSQE KQRIRLCL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17300.1	9e-51	MYB_related family protein