PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM84933.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

WRKY

Protein Properties

Length: 934aa MW: 101118 Da PI: 9.0272

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM84933.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	94.1	9.9e-30	796	855	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 ++Dg++WrKYGqK kg+++pr+YYrCt+a gCpv+k+v+r+ ed +++++tYeg+Hnh+ OWM84933.1 796 MNDGCQWRKYGQKISKGNPCPRAYYRCTMApGCPVRKQVQRCLEDMSILITTYEGTHNHP 855 58*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 934 aa Download sequence
MDRSEPALIP EWLKSSGSAT SGGYGNHQYS SSLHSDDHSL SKHARNKSSF VNSEHDGSRS 60 FGSEKTTSTY FRRSTSGKDS SHSRSYSSFN RSHRDREWED GPDFRDKDRS IPGDHRHREY 120 SDHIGGVLPG KFSKETLRRS QSMVSRKPEG NLPKKVAGDS GDASNSNNHI KSSSLLLPSG 180 SVPSSMQTSF GRDFPSLGAD QKQSSSELRR VPSPVLPSAV HSLPGPGAGV IGADGWTSSL 240 AEVPGVIASS STGSLPSQQA VSGGSVPLAQ RVGGLNMAEA VAQGPSRART PPQVSVDSQR 300 LEELAIKQSR QLIPVIPSTP KPVLLGPSDK SKPKTGQQQS QFLTSQSNQS LRGGSAKFDS 360 GKTSSNLGKL QVLKPARELN GVTSTVVKEN LSPKNGVKVV NTPLSLNPAA TAASAPLRIP 420 ANIQNSAGPE RKSPTISANL EKRPSSLQGQ SRSDFFNLLK KKSSSSASNS PAGNEAMSSA 480 PDKALGSVAE DSAAAATGVA DSLTSESKLD HSSDLPTENG GKVMANGEGN EGMHYLNGNG 540 EDQSDIDVPY PDEKEAAFLR SLGWEENAGE DGGLTEDEIR TFYELTISAV RPTDGEEARV 600 DNSGRNAVDF ESALNLKKKK KNEKMKSRSE VLRKERDRIE EENQMLRQTV EQTMKDYYDL 660 QTKVELLLRR GTDHNPKTYL SLWGNDKQIL DHPIEATQCK ETSQSMPSLS KDDKDAMTVE 720 TDHLGLSLKI RNCRDSHRYP DMERGSELQP ISSMIQEKMP PTRNERDSIM AAGLSKSAFN 780 RKNRVSVRAR CDSGTMNDGC QWRKYGQKIS KGNPCPRAYY RCTMAPGCPV RKQVQRCLED 840 MSILITTYEG THNHPLPVGA TAMASTASSS KPAPDAAAPF VLLDPSRHGI PQLPSPDATA 900 SNFVAHCQMP FPINNQSAST LLMKMMNPHY YVAN

Sequence ? help Back to Top

Protein Sequence Length: 934 aa Download sequence

MDRSEPALIP EWLKSSGSAT SGGYGNHQYS SSLHSDDHSL SKHARNKSSF VNSEHDGSRS  60
FGSEKTTSTY FRRSTSGKDS SHSRSYSSFN RSHRDREWED GPDFRDKDRS IPGDHRHREY  120
SDHIGGVLPG KFSKETLRRS QSMVSRKPEG NLPKKVAGDS GDASNSNNHI KSSSLLLPSG  180
SVPSSMQTSF GRDFPSLGAD QKQSSSELRR VPSPVLPSAV HSLPGPGAGV IGADGWTSSL  240
AEVPGVIASS STGSLPSQQA VSGGSVPLAQ RVGGLNMAEA VAQGPSRART PPQVSVDSQR  300
LEELAIKQSR QLIPVIPSTP KPVLLGPSDK SKPKTGQQQS QFLTSQSNQS LRGGSAKFDS  360
GKTSSNLGKL QVLKPARELN GVTSTVVKEN LSPKNGVKVV NTPLSLNPAA TAASAPLRIP  420
ANIQNSAGPE RKSPTISANL EKRPSSLQGQ SRSDFFNLLK KKSSSSASNS PAGNEAMSSA  480
PDKALGSVAE DSAAAATGVA DSLTSESKLD HSSDLPTENG GKVMANGEGN EGMHYLNGNG  540
EDQSDIDVPY PDEKEAAFLR SLGWEENAGE DGGLTEDEIR TFYELTISAV RPTDGEEARV  600
DNSGRNAVDF ESALNLKKKK KNEKMKSRSE VLRKERDRIE EENQMLRQTV EQTMKDYYDL  660
QTKVELLLRR GTDHNPKTYL SLWGNDKQIL DHPIEATQCK ETSQSMPSLS KDDKDAMTVE  720
TDHLGLSLKI RNCRDSHRYP DMERGSELQP ISSMIQEKMP PTRNERDSIM AAGLSKSAFN  780
RKNRVSVRAR CDSGTMNDGC QWRKYGQKIS KGNPCPRAYY RCTMAPGCPV RKQVQRCLED  840
MSILITTYEG THNHPLPVGA TAMASTASSS KPAPDAAAPF VLLDPSRHGI PQLPSPDATA  900
SNFVAHCQMP FPINNQSAST LLMKMMNPHY YVAN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68150.1	2e-55	WRKY family protein