PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM84832.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ZF-HD
Protein Properties Length: 352aa    MW: 38031.3 Da    PI: 7.8456
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM84832.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer103.51.4e-3295149358
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreve 58 
                  +vrY+eClkNhAa++Gg+a+DGCgEfmps geegt++al+C+ACgCHRnFHR+eve
   OWM84832.1  95 TVRYRECLKNHAAAMGGTAMDGCGEFMPS-GEEGTIEALNCSACGCHRNFHRKEVE 149
                  79**************************9.999********************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 352 aa     Download sequence    
MDIPIPAQEG DIPVPAPPLS STAGYGGGGG GHGHMLGHHH HHHHDPTSHH INDVPGNAIN  60
GPMEEQHPHH QVVVAGYNNK NNNNGSTNGS SNKVTVRYRE CLKNHAAAMG GTAMDGCGEF  120
MPSGEEGTIE ALNCSACGCH RNFHRKEVEG GGGGGGHDLA LDQWYHHHHH SPPHLNRVGR  180
KVLVGHPHHK NVLGGHEAAL LYPTGTLIAS RTPTPHQMIL PYSMAGSLPS ESDEQDQDDA  240
HHIGGGGGGI GGGAVTTSAR PTQMVKKRFR TKFTQEQKEK MLSFAEKVGW KIQRQEESVV  300
QQFCQEIGVK RRVLKVWMHN NKHNLAKKNL SCSLNHSPTS NINISDTNNV NP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.11e-65ZF-HD family protein