PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM84345.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family ARR-B
Protein Properties Length: 525aa    MW: 57065.1 Da    PI: 5.9336
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM84345.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like604.8e-19237291155
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 kprl+W   L +rF +++ +LGG+++A Pk+i elm+ + Lt+e+++SHLQk+Rl
  OWM84345.1 237 KPRLVWGAHLQSRFSSVICNLGGADNAKPKKIWELMGEPELTRENIASHLQKHRL 291
                 79****************************************************8 PP
2Response_reg25.28.1e-10261292104
                   EEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHH.HTTES CS
  Response_reg   2 livdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedaleal.kaGak 95 
                   +  d +++ +++l  +l+k  +++va+ +++++a ++l      +D++++ ++  +md +++l++  +++  +p++v++a ++++++ +a+ k G+ 
    OWM84345.1  26 MALDSNRACLKILIAMLRKCSFTVVAAERSAQKAQKKLISGSapCDIVVTELKRFDMDIFQFLRSASQRG--IPVVVLSAWEDKDMISAAIiKGGVA 120
                   6668899999************99**999*****9999666667********************998887..******************99999** PP

                   EEEESS--H CS
  Response_reg  96 dflsKpfdp 104
                   ++  Kp + 
    OWM84345.1 121 QYMRKPANL 129
                   ******775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 525 aa     Download sequence    
MKEADHRAFP ATLGFEENFP DGLRVMALDS NRACLKILIA MLRKCSFTVV AAERSAQKAQ  60
KKLISGSAPC DIVVTELKRF DMDIFQFLRS ASQRGIPVVV LSAWEDKDMI SAAIIKGGVA  120
QYMRKPANLT STKSIWTHVY RAKLCACING SPNNGINTIS NGDGLPRSPC PTADNAPTEA  180
AHLAETYNHA VEERMNEAHK DDTHTGSMLY STNNREERVE KEEVGGDEVQ NLAPKMKPRL  240
VWGAHLQSRF SSVICNLGGA DNAKPKKIWE LMGEPELTRE NIASHLQKHR LNIRKQVAEA  300
HLGGAVASLQ QSGNPTTPNP NHNAVASPNL QVHPDQTAAL YNQPYHPTMP VQLPMWTDNL  360
VAIQPSFPLE MGGDTRMNNP QANWLGMEGQ DTFGNPYNDP FQPNAPSSNP IWEAFNQQFI  420
DYDPVLDFEN DSAGAYQPVL DFGNNTAGGL EVPSISTGIV DMMQHGGASL YPVANGTLPG  480
YTWAHDAPSA HNFIAAGSSA MVSGPVHQDA NISSALDTPS GTFST
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16857.21e-30ARR-B family protein