PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM84116.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MYB | ||||||||
Protein Properties | Length: 268aa MW: 30549.2 Da PI: 7.1017 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 47 | 5.7e-15 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed++l+d+v+ +G ++W+ +ar+ g+ R++k+ ++rw++yl OWM84116.1 15 KGAWTALEDKILKDYVTAHGDRRWHIVAREAGLSRSAKSSRLRWLNYL 62 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.3 | 1.4e-16 | 68 | 112 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ T++E++l+++++k+lG++ W++Ia +++ gRt++++k++w++ OWM84116.1 68 RGNITKDEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTN 112 7999******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 268 aa Download sequence |
MGRGPSNGRG DKLNKGAWTA LEDKILKDYV TAHGDRRWHI VAREAGLSRS AKSSRLRWLN 60 YLRPDIKRGN ITKDEEDLII RLHKLLGNRW SLIAGRLPGR TDNEIKNYWN TNLIKKLEKA 120 SHTNNRRVND QTKTKIETFE TEKPSALLQH DIAKLQFLND DICLDPARSG GRESLLDHNN 180 SGYCCSAATT LVEVSGQLKM DFLVDDVDRS ITNLEYEFSR LRDYDACLTG SASNACSEDF 240 LGQSFQWLPE GFLDNRSWEF ASGEDWVI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35550.1 | 6e-53 | MYB family protein |