PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OWM84112.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
|
||||||||
Family | MYB | ||||||||
Protein Properties | Length: 264aa MW: 29699.9 Da PI: 8.0279 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 48.4 | 2.2e-15 | 16 | 63 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+ Ed++l+d+vk+ G g W ++ ++ g++R++k+c++rw++yl OWM84112.1 16 KGAWTAIEDQILIDYVKKNGEGKWGRVIKETGLRRCGKSCRLRWLNYL 63 79********************************************97 PP | |||||||
2 | Myb_DNA-binding | 49 | 1.4e-15 | 69 | 113 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ + +E+el+v+++k+lG++ W++Ia +++ gRt+ ++k++w+ + OWM84112.1 69 RGNISDDEEELIVRLHKLLGNR-WSLIAGRLP-GRTDGDIKNYWNRV 113 7899******************.*********.***********986 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 264 aa Download sequence |
MGRKPRPTHL KDGLKKGAWT AIEDQILIDY VKKNGEGKWG RVIKETGLRR CGKSCRLRWL 60 NYLRPNIKRG NISDDEEELI VRLHKLLGNR WSLIAGRLPG RTDGDIKNYW NRVLKKKSKL 120 GSERPKTSKT KKEITIKDRC DEVAEAKDPE DQPLERNAAG SAVFAKASTG NTTISQAEGQ 180 LILPIMAVEN IDGCTWDFAA VDDKLNEIFV SEFVSPYSLE ANERPGECEN GFVIKPCVLS 240 SSDDLLGGEL SEQMMCEWAA ELMY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G40330.1 | 2e-52 | MYB family protein |