PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM83175.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 277aa    MW: 29820.5 Da    PI: 10.6706
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM83175.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.82.2e-12125169347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+  ++ + k+lG g+W+ I++   ++Rt+ q+ s+ qky
       OWM83175.1 125 PWTEEEHRTFLIGLKRLGRGDWRGISKNYVTTRTPTQVASHAQKY 169
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 277 aa     Download sequence    
MGRKCSHCGN IGHNSRTCSS YRALVSPSSA AFPSNNCGIR LFGVHLDLSS SSSNSSSASP  60
STPSASPSPS SSSSSIAIAN NMKKSFSLAS LSPSHVSNSD DNKIPAGYLS DGLAGRSQDK  120
RKGVPWTEEE HRTFLIGLKR LGRGDWRGIS KNYVTTRTPT QVASHAQKYF LRQACLDKKK  180
RRSSLFDMVT SNDTTRNQKP DYPRSLNQQN ISSTLPFFGS ISPLQKLHLR RIKPEPSNAV  240
DPDLELSLAA PPGPLEGRKN APAAATGCLF IGSIRVT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1178182KKKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.14e-59MYB_related family protein