PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | OWM83117.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 443aa MW: 51111.6 Da PI: 7.5091 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 11.9 | 0.00068 | 201 | 223 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y C+ C +rk++L+rH+r++ OWM83117.1 201 YFCEFCLNFMKRKEQLQRHMRKC 223 78*******************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 443 aa Download sequence |
MGSIDPPKSE DNGSATAAVD LKSIAADGMP PLPAKQSNGT VTEPDAASKR RKASMLPLEV 60 GTRVMCRWRD GKYHPVKVIE RRKLGPNGLC DYEYYVHYTE FNRRLDEWVK LEQLDLDSVE 120 TVVDEKVEDK VTGLKMTRHQ KRKIDETHVE GHEELDAASL REHEEFTKVK NIATIELGRY 180 EIETWYFSPF PPEYNDCSKL YFCEFCLNFM KRKEQLQRHM RKCDLKHPPG DEIYRSGTLS 240 MFEVDGKKNK VYGQNLCYLA KLFLDHKTLY YDVDLFLFYI LCECDDRGCH MVGYFSKEKH 300 SEESYNLACI LTLPPYQRKG YGKFLIAFSY ELSKKEGKVG TPERPLSDLG LLSYKGYWTR 360 VLLDILKKHK GNISIKELSD MTAIKADDIL NTLQSLDLIQ YRKGQHVICA DPKVLDRHLK 420 AAGRGGLEVD VSKLIWTPYR EQG |