PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM82484.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Trihelix

Protein Properties

Length: 451aa MW: 51598.2 Da PI: 6.4697

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM82484.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	75.5	8.4e-24	95	192	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk...........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 +Wt+ +v++Li a+ +++++++++ +kk++W++vs++m+e+gf +sp+qC++k+++lnkryk+++++ +k+ +++++++ +++ ++ OWM82484.1 95 KWTDTMVRLLIMAVFYIGDEVGSEPndpkkksggllQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGtACRVVENQGLLETMD 192 7************999999976445667889999********************************************5599999999998886 PP

Sequence ? help Back to Top
Protein Sequence Length: 451 aa Download sequence
MFSGMGSGML GLEMPPHQTP SNAQNPNSLQ HPQIVGFDPH HSQSQQIKPT GYQYSSSKSK 60 QQLTLSEDDE HDDNSAGDPK KSGNNSKSSP WQRMKWTDTM VRLLIMAVFY IGDEVGSEPN 120 DPKKKSGGLL QKKGKWKSVS RAMMEKGFYV SPQQCEDKFN DLNKRYKRVN DILGKGTACR 180 VVENQGLLET MDLSPKMKEE VKKLLNSKHL FFREMCAYHT SCGHGVAPGG SSGAHNSPEQ 240 HQQQQQQRCP HGATENHLPM GEKDIPSRAE ADSSKVAGRG GSGEEEYDDD EDDDSEDGEN 300 DDDDEDVQED HEHENDVWNL NHPRKRPRKF SYSPSPAVVQ QLNGEVLGII QDSVRSPWEK 360 KQWVKGKLLQ LEEQQVRYRG EAYELERQRL KWLKFSVKKE REMERAKLEN ERRMLENQRL 420 VLLLRQRELE LLDPQQHQHQ QNSSNKRSDP S

Sequence ? help Back to Top

Protein Sequence Length: 451 aa Download sequence

MFSGMGSGML GLEMPPHQTP SNAQNPNSLQ HPQIVGFDPH HSQSQQIKPT GYQYSSSKSK  60
QQLTLSEDDE HDDNSAGDPK KSGNNSKSSP WQRMKWTDTM VRLLIMAVFY IGDEVGSEPN  120
DPKKKSGGLL QKKGKWKSVS RAMMEKGFYV SPQQCEDKFN DLNKRYKRVN DILGKGTACR  180
VVENQGLLET MDLSPKMKEE VKKLLNSKHL FFREMCAYHT SCGHGVAPGG SSGAHNSPEQ  240
HQQQQQQRCP HGATENHLPM GEKDIPSRAE ADSSKVAGRG GSGEEEYDDD EDDDSEDGEN  300
DDDDEDVQED HEHENDVWNL NHPRKRPRKF SYSPSPAVVQ QLNGEVLGII QDSVRSPWEK  360
KQWVKGKLLQ LEEQQVRYRG EAYELERQRL KWLKFSVKKE REMERAKLEN ERRMLENQRL  420
VLLLRQRELE LLDPQQHQHQ QNSSNKRSDP S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G10040.1	9e-66	Trihelix family protein