PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM82098.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GRAS
Protein Properties Length: 545aa    MW: 61089 Da    PI: 6.2032
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM82098.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3351.4e-1021615413374
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                 e Lle A+a+++++  ++q+l++ l+el sp+gd  q+la+yf++AL +r+++s+++  +al + ++++ + +++ +++  f+evsP+ +f+h+ +N a
  OWM82098.1 161 EILLETARAIADKNSGRVQHLMWMLNELGSPYGDIDQKLASYFLQALFSRMTDSGERSHRALMAASDKTCSFESTRKMVLKFQEVSPWTTFGHVSCNGA 259
                 689*****************************************************9999998777775554444455556****************** PP

        GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg........skeeleetgerLakfAeelgvpfefnvlvak.rledlel 191
                 I+ea+ege ++HiiD++ + ++QWp+Ll+aLa+R++++p+lR+T+v+ ++++         ++ ++e+g+r++kfA+ +gvpf+fnv+++  +l++l+l
  OWM82098.1 260 IMEALEGEPKLHIIDISNTFCTQWPTLLEALATRTDETPHLRLTTVVVAAASranggtagVQKVMKEIGNRMEKFARLMGVPFKFNVVHHAgDLSELNL 358
                 *********************************************998777788999999999************************97767******* PP

        GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh....nsesFlerflealeyysalfdsleaklpreseerikvE 286
                 +eL+++ +Eala+n+v ++h++     +++++rd+v+  +++l+P++v+vve+ead+    ++++F+++f e+l+++ + f++le+++p++s+er ++E
  OWM82098.1 359 SELDIRDDEALAINCVGSMHSIT----PMSNRRDHVIASFRQLNPRIVTVVEEEADLdlgvDGPEFVRGFGECLRWFRVYFEALEESFPSTSNERLMLE 453
                 **********************8....999999*********************8872222466*********************************** PP

        GRAS 287 rellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve..eesgslvlgWkdrpLvsvSaWr 374
                 r+  gr+iv++vac    + er+e +++W++rl++ GF+p ++s++  +++++llr++k +g+ +    +s+ ++l+Wkd+p+v++SaWr
  OWM82098.1 454 RA-GGRAIVDLVACPLGVSGERRELAGRWSRRLRAGGFGPSSYSDELCDDMRALLRRYK-EGWAMAqcPDSAGMFLTWKDQPVVWASAWR 541
                 **.9*******************************************************.666665336799999**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 545 aa     Download sequence    
MDTLFRLVSL HPQQHHQHQQ QQQQSSNQSS FNSTSRTSSS SRSSKQTYSQ PGHNYYNSYY  60
PYNNIHHHHQ EDQEVEGGEE CFNFFMDEDD FSSSSSKHYF PTNYPPTNTS TPTTTTTTTA  120
GGHHSYDPAT TTTAGTGDFS SFSPARDPLS FDLSGHRWAS EILLETARAI ADKNSGRVQH  180
LMWMLNELGS PYGDIDQKLA SYFLQALFSR MTDSGERSHR ALMAASDKTC SFESTRKMVL  240
KFQEVSPWTT FGHVSCNGAI MEALEGEPKL HIIDISNTFC TQWPTLLEAL ATRTDETPHL  300
RLTTVVVAAA SRANGGTAGV QKVMKEIGNR MEKFARLMGV PFKFNVVHHA GDLSELNLSE  360
LDIRDDEALA INCVGSMHSI TPMSNRRDHV IASFRQLNPR IVTVVEEEAD LDLGVDGPEF  420
VRGFGECLRW FRVYFEALEE SFPSTSNERL MLERAGGRAI VDLVACPLGV SGERRELAGR  480
WSRRLRAGGF GPSSYSDELC DDMRALLRRY KEGWAMAQCP DSAGMFLTWK DQPVVWASAW  540
RPTAN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.10.0GRAS family protein