PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM82016.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | Trihelix | ||||||||
Protein Properties | Length: 598aa MW: 68855.3 Da PI: 5.4513 | ||||||||
Description | Trihelix family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | trihelix | 40.1 | 9.7e-13 | 120 | 169 | 2 | 56 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwen 56 W+++ev aL+++ ++me+++ + We+vs+k++e gf+rs+++Ckek+e+ OWM82016.1 120 WSNEEVVALLRIGSNMENWFPQV-----TWEHVSRKLAELGFKRSAEKCKEKFEE 169 ********************998.....9************************86 PP | |||||||
2 | trihelix | 95.1 | 6.8e-30 | 472 | 564 | 1 | 86 |
trihelix 1 rWtkqevlaLiearr......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdqle 86 rW+++evlaLi++r e+ ++ ++g+ k+plWe++s++m+e g++rs+k+Ckekwen+nk+++k+k+++ +r +s +s+tcpyf+ql+ OWM82016.1 472 RWPREEVLALINLRCtiqgnnEDSDHHQQGAVKAPLWERISQRMSELGYTRSAKRCKEKWENINKYFRKTKDSNVSRkRSADSRTCPYFHQLN 564 8*************96776666666777789********************************************99679***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 598 aa Download sequence |
MFDGVPEQFH QFIASSRASS SPLPLPPQLS AFPFHGFDPF PNPNPTPIPH PPPSPPPLSA 60 SHHQHHLLHL HHPSLLLHHK DVAAEEEEGK ERSLLAMSAN FDIEARVDRS MPEPVDHGPW 120 SNEEVVALLR IGSNMENWFP QVTWEHVSRK LAELGFKRSA EKCKEKFEEQ TRTSFNDDNH 180 NNINININYS KNNNNYRLLV NELEELYDHH HHENPPTPPE QHQQLHEVPQ SNDNDDGNVE 240 KPMEEEDKEE EEEEVGRGGV EGEKMGQNNM EEVDSQAVET TSLAEDEKRL KEEREEDKVA 300 KKRKRWEKFE MFKRFCESVV ERLMAQQEEM HNKLLEDMMR RDREMVEKEE AWKKMEMERL 360 NKELDMRAQE QAVAGNRQAT IIEFLKGFTS PSCEADKDGK DPIPNPRNPT ARVDTEKEPK 420 TPSSTAGPAE DDRPNLTPPP PALVSPNPNS SSTPRNLRTS NTTGECSDTG KRWPREEVLA 480 LINLRCTIQG NNEDSDHHQQ GAVKAPLWER ISQRMSELGY TRSAKRCKEK WENINKYFRK 540 TKDSNVSRKR SADSRTCPYF HQLNALYNQR NKPVPMPEPL ENRPSSPENS PSLQDTTQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28300.1 | 1e-58 | Trihelix family protein |