PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM81863.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

C2H2

Protein Properties

Length: 236aa MW: 26133 Da PI: 7.8171

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM81863.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.7	0.00018	89	111	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H OWM81863.1 89 FSCNYCQRKFYSSQALGGHQNAH 111 89******************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MEGGHSGIQL QEQQLEGHLR FQGVNPPIFL DLSLSRELDP GSDGGSKPEL NLIDGFEPTD 60 SVSPPNSEQT PQDNETEQQQ QQQQQHRVFS CNYCQRKFYS SQALGGHQNA HKRERTLAKR 120 ASSSNANRYL SIASLPLHGS FHRSLGIQAH SSMVHKPWHR QAFDQQPGIG RLIQESFRSA 180 PNIGSPSGLG AARFDGLRWF PNASEGTGGM VLWGGASHMM KSRPDEIQKL DLSLKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25160.1	2e-34	C2H2 family protein