PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM81764.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MYB | ||||||||
Protein Properties | Length: 405aa MW: 43470.5 Da PI: 5.3359 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.7 | 1.1e-17 | 60 | 105 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +g+W++eEd +l ++v ++G+++W++Iar + gR++k+c++rw + OWM81764.1 60 KGPWSPEEDAILSQLVSKFGPRNWSLIARGIS-GRSGKSCRLRWCNQ 105 79******************************.***********985 PP | |||||||
2 | Myb_DNA-binding | 58.4 | 1.6e-18 | 112 | 156 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r+++T eEd ++v+a++ +G++ W++Iar ++ gRt++ +k++w++ OWM81764.1 112 RKPFTDEEDRIIVRAHAIHGNK-WASIARLLP-GRTDNAIKNHWNST 156 789*******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 405 aa Download sequence |
MEIEMHTDDK VIPEIDVSIA AAGGADAASG DEGGAEGAGG GDGSGSSSGG GGKAGKDRVK 60 GPWSPEEDAI LSQLVSKFGP RNWSLIARGI SGRSGKSCRL RWCNQLDPAV KRKPFTDEED 120 RIIVRAHAIH GNKWASIARL LPGRTDNAIK NHWNSTLSRR IWEFDHILDA GKTTDDASLD 180 QMKASSEETL SCGDANSFKS LEGKDVSSLE NTTEPCEDKS ITVEKFNHEV REPPTLFRPV 240 ARVSAFNVYN ASDGPEPASS FPGPIPMPGQ TLRPDSGFCK LLEGVYGERM VPHHCGYGCC 300 KTDGGPRPDA QTPLLGPEFV EYSEPPPFPS YELAAIATDI SNIAWLKSGL ENGSVRGMNN 360 TAMRVTSGVF RVQVGHPEEG RVNNSVRFED GKNKLMGTMA NVLST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G09230.1 | 3e-90 | MYB family protein |