PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM81682.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GRAS
Protein Properties Length: 502aa    MW: 56356.4 Da    PI: 4.4192
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM81682.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS137.41.5e-421325001374
        GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaN 99 
                 l +lL +c ea+++g++el++ +L r+ e++sp g p++R+a  + +  + +  +           +++s    ++   al++f++++P+ +f+h++aN
  OWM81682.1 132 LHHLLKACGEAMEKGKTELVEVILRRMAERSSPLGGPLERAAVNLSRDFNDHDRD---------YLKQES---WKNYREALRVFYQAFPYGRFAHFVAN 218
                 5799**************************************9866666555544.........344444...3444567889**************** PP

        GRAS 100 qaIleavege.ervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvk 197
                 +aIlea+  e e++ i+Dfd+++GlQWp+L++aL +R +gp +l++T  +s   +++ + e+t+  L ++A++ gv++  ++   k +e+l  e  + +
  OWM81682.1 219 SAILEAIPIEaEAIQIVDFDLGEGLQWPPLIEALGQR-HGPLKLKLTCKAS---EDEAKFETTRGHLCNYAASAGVNLTVEI---KGIEELVGEYTDES 310
                 *******99889************************9.6779*****9888...5899****************99987776...55555544444444 PP

        GRAS 198 p....gEalaVnlvlqlhrlldesvsleserdevLklvkslsPk..........vvvvveqe..adh.nsesFlerflealeyysalfdsleaklpres 279
                 +     E +a n+++ + ++   +v+++ e   +Lk+ +++ +k          +v++ + +   ++ + +sF + f   l++y a+++s+e+++p++ 
  OWM81682.1 311 KseghFEWIAFNCMVGVPQMG--RVASRREVVGFLKAANGILSKlgdsfgdrrgIVTFGDGNacGNLrDVPSFGAFFEGRLKHYQAVLESMESNFPSHL 407
                 434459**********99998..55555556889999998877645555555558****99954455556699999999****************9987 PP

        GRAS 280 .eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdg.yrveeesgslvlgWkdrpLvsvSaWr 374
                   +r  +E  ++++ i++      ++r e+ +t     +   + GF+p+ ++++  ++++ +l++ + s g  +v e+++++vl W++ pL+ vS W+
  OWM81682.1 408 qGARLAMESLFVAPFISSS---DWFQRWEDVRT--GLDDPPASLGFSPLGIGQQSLTEIQEMLKESEsSYGvRSVGESQNEMVLEWRGTPLIRVSTWK 500
                 699*******999999864...33444444443..345677899***********************66673345599*******************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 502 aa     Download sequence    
MMQWEILQPS WPLYSIIHQE NNPYFDQNEH RFECPSFVTT TFQDPLPLPG CPDNLIDDFP  60
MDFEPWDDFP ALFDVLEGTE LETLMTSSDD NGWSPSPSPS LKSTSTTDAL SVSQQLLVLP  120
HEEMETDAQL CLHHLLKACG EAMEKGKTEL VEVILRRMAE RSSPLGGPLE RAAVNLSRDF  180
NDHDRDYLKQ ESWKNYREAL RVFYQAFPYG RFAHFVANSA ILEAIPIEAE AIQIVDFDLG  240
EGLQWPPLIE ALGQRHGPLK LKLTCKASED EAKFETTRGH LCNYAASAGV NLTVEIKGIE  300
ELVGEYTDES KSEGHFEWIA FNCMVGVPQM GRVASRREVV GFLKAANGIL SKLGDSFGDR  360
RGIVTFGDGN ACGNLRDVPS FGAFFEGRLK HYQAVLESME SNFPSHLQGA RLAMESLFVA  420
PFISSSDWFQ RWEDVRTGLD DPPASLGFSP LGIGQQSLTE IQEMLKESES SYGVRSVGES  480
QNEMVLEWRG TPLIRVSTWK CY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.16e-17GRAS family protein