PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM81626.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Protein Properties

Length: 915aa MW: 100228 Da PI: 6.4067

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM81626.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	57.2	3e-18	312	411	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 f+kvl+ sd+++ grlvlpk +ae++ ++++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++l ++ OWM81626.1 312 FEKVLSASDAGRIGRLVLPKACAEAYfpPISQPEGLPLRIQDVKGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRME-PEGKLIMG 408 99************************555567778***********99899999999.*******************876.77777777 PP EE- CS B3 96 vfr 98 +++ OWM81626.1 409 FRK 411 766 PP

Sequence ? help Back to Top
Protein Sequence Length: 915 aa Download sequence
MGSKTCMNML CGESTSGEGR KGWPLRSGES AVLCDKCGSV YEESIFCDIF HAKDSGWREC 60 TSCGKRLHCG CIASRFLLEL LDCGGVSCVS CARSSGLRPM ANDEKPTDFG MLNAGPGELR 120 SASGGKHYDG DGFEKLKLMQ PRSNIENSGL RYLLQHDDPN SLSAQMKQED VLPSPEEIGK 180 SRFQFSSKAS NGAANNLDDS LAQPNLSIAL GGPSGSLNPF LGVVFDEKGQ SRTLSLSQQG 240 SKSRHLLPKP PKSAIPSALE ANRGIVPQIR VARPPAEGRG RNQLLPRYWP RITDQELQQI 300 SGDSNSTIVP LFEKVLSASD AGRIGRLVLP KACAEAYFPP ISQPEGLPLR IQDVKGKEWV 360 FQFRFWPNNN SRMYVLEGVT PCIQSMQLQA GDTVTFSRME PEGKLIMGFR KASASVAMQE 420 TQLSAMTNGT HSTEAFFSGS FENLPVISGY SSFLQSLKGN ADPHINALSK HFTSTSGDIN 480 WQNSEKNEGR REPFLPPSML APDRKRTRNI GMNSKRLLID SQEALELKLT WEEAQDLLRP 540 PLGVQPSVVV VEDHAFEEYD VSSFARKILP IPEPPVFGKR SIFVIRSSGM QEQWAQCDGC 600 AKWRKLPVDI LLPARWTCTD NSSDESRCSC SAPEELGPRE MENLLRLNKD FKRQRLAAAS 660 FRLLPDVESS SGLDALANAA ILGDSTGGAA TTSSVAATTK HPRHRPGCSC IVCIQPPSGK 720 GKHKPTCNCN VCMTVKRRFK TLMMRKKKRQ SEREAEIAQQ KNRKTWAPKD EAEADSSSRN 780 LSPLLDSSEP QSPINDYPPG NSVDISKGQT IDLNCQPERD EDPRGTSRVS MLSLLQVASQ 840 PLESYLKQNG LTSLVSEQQE SGSGQVQAPA SAESEGHDEE DHDRDLCGAS EVQEKLPEQD 900 EDMGQEPSGP DQSQT

Sequence ? help Back to Top

Protein Sequence Length: 915 aa Download sequence

MGSKTCMNML CGESTSGEGR KGWPLRSGES AVLCDKCGSV YEESIFCDIF HAKDSGWREC  60
TSCGKRLHCG CIASRFLLEL LDCGGVSCVS CARSSGLRPM ANDEKPTDFG MLNAGPGELR  120
SASGGKHYDG DGFEKLKLMQ PRSNIENSGL RYLLQHDDPN SLSAQMKQED VLPSPEEIGK  180
SRFQFSSKAS NGAANNLDDS LAQPNLSIAL GGPSGSLNPF LGVVFDEKGQ SRTLSLSQQG  240
SKSRHLLPKP PKSAIPSALE ANRGIVPQIR VARPPAEGRG RNQLLPRYWP RITDQELQQI  300
SGDSNSTIVP LFEKVLSASD AGRIGRLVLP KACAEAYFPP ISQPEGLPLR IQDVKGKEWV  360
FQFRFWPNNN SRMYVLEGVT PCIQSMQLQA GDTVTFSRME PEGKLIMGFR KASASVAMQE  420
TQLSAMTNGT HSTEAFFSGS FENLPVISGY SSFLQSLKGN ADPHINALSK HFTSTSGDIN  480
WQNSEKNEGR REPFLPPSML APDRKRTRNI GMNSKRLLID SQEALELKLT WEEAQDLLRP  540
PLGVQPSVVV VEDHAFEEYD VSSFARKILP IPEPPVFGKR SIFVIRSSGM QEQWAQCDGC  600
AKWRKLPVDI LLPARWTCTD NSSDESRCSC SAPEELGPRE MENLLRLNKD FKRQRLAAAS  660
FRLLPDVESS SGLDALANAA ILGDSTGGAA TTSSVAATTK HPRHRPGCSC IVCIQPPSGK  720
GKHKPTCNCN VCMTVKRRFK TLMMRKKKRQ SEREAEIAQQ KNRKTWAPKD EAEADSSSRN  780
LSPLLDSSEP QSPINDYPPG NSVDISKGQT IDLNCQPERD EDPRGTSRVS MLSLLQVASQ  840
PLESYLKQNG LTSLVSEQQE SGSGQVQAPA SAESEGHDEE DHDRDLCGAS EVQEKLPEQD  900
EDMGQEPSGP DQSQT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	736	747	KRRFKTLMMRKK
2	736	749	KRRFKTLMMRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein