PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM81612.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | C2H2 | ||||||||
Protein Properties | Length: 258aa MW: 26649.2 Da PI: 7.6403 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 17.9 | 8.4e-06 | 43 | 63 | 1 | 21 |
EEETTTTEEESSHHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHir 21 y+C+ Cgk+F+++ L H+r OWM81612.1 43 YQCSECGKMFKSNKALYGHMR 63 9*******************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 258 aa Download sequence |
MKNGINGVLG RRKALSLKLK ASKNGVKKQP LSSEEADGAA SSYQCSECGK MFKSNKALYG 60 HMRCHPDRGW RGFKNPVGIA VGPSLALVGP SWGNAGGFSA EEVEVAAALL VLAGGPCSME 120 SCGGASASPR SGFGLKEGLF TVWEASSNAV EGCGDSTGPG GRPSLKECGW HGTESGAETS 180 MATEEEEEEQ RVVVPLPDVE SFSVSLAAGS WGKCFGVQPG SSRKGLDLNQ LPILIAGKNS 240 SACRGAVNAM VLDLTLRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17180.1 | 5e-12 | C2H2 family protein |