PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM81569.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family GRAS
Protein Properties Length: 454aa    MW: 48868 Da    PI: 4.8593
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM81569.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS369.93.4e-113924513374
        GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNqa 101
                  lLl+cAe+v+ ++le a+ lL ++s l+sp g++ +R+aayf+ AL+ar+++s+ ++y+ l++++ + ++s++ ++al+ ++ ++P++kf+h+taNqa
  OWM81569.1  92 GLLLQCAECVAMDNLEDATDLLPEISVLSSPFGSSPERVAAYFAHALQARVVSSCLGTYSPLATRDLTLTQSQKIFTALQSYNSICPLIKFTHFTANQA 190
                 58************************************************************************************************* PP

        GRAS 102 IleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgE 200
                 I +a+ege+rvH++D+di+qGlQWp L+q L+sR+++  s+R+Tg+g+    s e le+tg++La+fA ++g+pfefn++  k  +  +l +L v+pgE
  OWM81569.1 191 IFQALEGEDRVHVVDLDIMQGLQWPGLFQILSSRSRKIRSMRVTGFGP----SLELLESTGRQLADFAGSFGLPFEFNPIEGKIGNLADLAQLGVRPGE 285
                 ************************************************....9**************************8777777779********** PP

        GRAS 201 alaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvva 299
                 a++V++++  h l+d ++s        L+l+ + +Pk++++veq+++h ++sFl rf+eal+yysalfd+l  +l ++s er+ vE++l+g ei+n+va
  OWM81569.1 286 ATVVHWMH--HCLYDITGSDLG----ALRLLGQARPKLITIVEQDLSH-GGSFLGRFVEALHYYSALFDALGDGLEAHSVERHAVEQQLFGSEIRNIVA 377
                 ******99..777777777777....9*********************.789*********************************************** PP

        GRAS 300 cegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                   g +r+ + + +e+W e l+++GF+pv+l+ + a+qa+lll +++++gy++ eesg l lgWkd +L+++SaW+
  OWM81569.1 378 VGGPKRTGEVK-VERWGEELGRVGFRPVSLGGSPAAQASLLLGMFPWKGYTLVEESGGLKLGWKDLSLLTASAWE 451
                 *****998887.9*************************************************************5 PP
Sequence ? help Back to Top
Protein Sequence    Length: 454 aa     Download sequence    
MLHSSSLVPI TSAPNLQSSS SSTMKSKRPA ERDFPRSGDS SGDDPSSKRP NISGDASVSG  60
EKAADDHDQE AAEPDSEAAE AEGESTGLRL LGLLLQCAEC VAMDNLEDAT DLLPEISVLS  120
SPFGSSPERV AAYFAHALQA RVVSSCLGTY SPLATRDLTL TQSQKIFTAL QSYNSICPLI  180
KFTHFTANQA IFQALEGEDR VHVVDLDIMQ GLQWPGLFQI LSSRSRKIRS MRVTGFGPSL  240
ELLESTGRQL ADFAGSFGLP FEFNPIEGKI GNLADLAQLG VRPGEATVVH WMHHCLYDIT  300
GSDLGALRLL GQARPKLITI VEQDLSHGGS FLGRFVEALH YYSALFDALG DGLEAHSVER  360
HAVEQQLFGS EIRNIVAVGG PKRTGEVKVE RWGEELGRVG FRPVSLGGSP AAQASLLLGM  420
FPWKGYTLVE ESGGLKLGWK DLSLLTASAW EPSD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41920.11e-178GRAS family protein