PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM81113.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 267aa    MW: 29672.4 Da    PI: 7.5043
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM81113.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding34.45.2e-114890246
                     SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46
                     g +++ E     ++++  G++ W++Ia+ ++ gRt++++k++w++
       OWM81113.1 48 GEFSEAEGRTVTRLHAVVGNR-WSLIAAQLP-GRTDNDVKDYWNT 90
                     678999999999*********.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MDARAGQQAP FLHCSTGFRT GASSLRMPDS RDAGRGGPIT LLSDLKHGEF SEAEGRTVTR  60
LHAVVGNRWS LIAAQLPGRT DNDVKDYWNT KLKRKLSRMG IYPDEMLHLL PTIEPPPGGI  120
TYSPYKTAGM RDETEDNTEE KIKLGLSRAI QEHNGTIVPV PASKTWVDPA GMGLSSSGNL  180
IRSCSSFPKP EFHYGPTRFT NEEGSPWNRR LCGKSRLNRR LREESEGGKD DECNGSNSLF  240
NLNCVLRDLL ADDLMNPIVW SRLDVME
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56110.16e-27MYB family protein