PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM81007.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

C2H2

Protein Properties

Length: 1303aa MW: 142237 Da PI: 5.0881

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM81007.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.9	1.8e-05	406	429	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 y+C++C++sF k+nL H+ + H OWM81007.1 406 YRCHKCTMSFEEKDNLLLHLLSsH 429 9*******************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 1303 aa Download sequence
MASATVDSSA TATPTATAAD DSRHLRFESL PLIDLRLLSQ SELYSLSLLS SPSPSSSSSC 60 QDDVVIPIPK IDRSVFNESA GSRKQTYFRL RLAPRTTSNP PHPPAPISRQ KNPEPFEEEN 120 SRIISLLKGL FYPHAESEPP LPTTPEDESS LIAVPVRYDE SVPETSDSVL QSIPIGVVDL 180 GFCNRKRGRP RKPEASLVNF ESLSEGKEVL AFEGDEDENS TEKGKAVEVG DLDLFEDELR 240 RRTEGMRTEE ELSGFLRGLS GEWGSRRKKR KIVDARSLGD VLPNGWKLLL SIKNDRDRVW 300 LGCSRYISPD GQQFESSKDV SAHLSSSFGV QDATHETSGP VDESSWSACK MASENSADPT 360 HQMDQKQNGV VCLSAVPISS IPADHLNQSP LPTSGSPGKS WTKETYRCHK CTMSFEEKDN 420 LLLHLLSSHK KSRSARNGAT SGDSVIMKDG KYECQLCHKL FEEKNRYSSH FGNHIKDYVK 480 RVEACGETNR VQRRTPRMQE QIGTERVSSA MPINTEANKK SSLGLPHAKI GSDAIPKTQE 540 RSDGHPVNIP CTEPVAVSKR DEEHVTEYIE KKEIDSGLPN ANVEVVDQGG KINTENNVSK 600 DMTTISSSPL KNGTSETPEE LKVLENENKV SMDSVSSMED RRQETVPLNE VFAPTENNNA 660 TNNESLVNRL FGSPMEEMDA DDGDEVGDNV LISGIEDRCF GLDKGVLNSG TQKISSEGCS 720 LVQFGREEKC ITSDDPTGSK TSVLENESGS ESRMPSSSQV LSPNDNQNKV GGRSQERVSY 780 NSWNGKKAVD FGENVTERMV PEADNSFPAI PSVNQQNCDF DENVKGFSGS KIQNPWRQQV 840 LESNLLSVHQ KSLSPDATVG KISSGTVSNV QLLSESCLDS AVHQQQQVFD SNVLSVHQKS 900 LSPDASAGKI SSGTMRNFQP PSESRSDPAV LNHVEKETPS GGIMPVTSPN QQAFVFNTHE 960 ARGPTFNEPK EYRGFTGLYA GDRDRVDKSG NLSVSGAEEK QNQGESMSYN KSSFGFDNRY 1020 SLQHGGPVTG FEAWANPPSR RVEAVTSDHR GATFFGSAVE ESKRSKESAF GFLSPSVGHQ 1080 QAGGTGYNLD MFYGGAVPDN RRADNVGTLR NEQMTGLYNQ QVPKPREEPM AQSMWRVEQN 1140 VNILPNSGLN YVPSSAAQPP DCFPAFNMVS DKVQNEFYGS NQKPGNAPAV GGGMKSSGGG 1200 GFMEYNFLSA PSSGQGSHIS SFNQQMGQGF ESNWVEKEAL GLFPKMGSSG SSSSGSRQHQ 1260 VTALCVWCGN QFSHDGDFDV GDGSVGYMCF NCKAKFAGQI NFF

Sequence ? help Back to Top

Protein Sequence Length: 1303 aa Download sequence

MASATVDSSA TATPTATAAD DSRHLRFESL PLIDLRLLSQ SELYSLSLLS SPSPSSSSSC  60
QDDVVIPIPK IDRSVFNESA GSRKQTYFRL RLAPRTTSNP PHPPAPISRQ KNPEPFEEEN  120
SRIISLLKGL FYPHAESEPP LPTTPEDESS LIAVPVRYDE SVPETSDSVL QSIPIGVVDL  180
GFCNRKRGRP RKPEASLVNF ESLSEGKEVL AFEGDEDENS TEKGKAVEVG DLDLFEDELR  240
RRTEGMRTEE ELSGFLRGLS GEWGSRRKKR KIVDARSLGD VLPNGWKLLL SIKNDRDRVW  300
LGCSRYISPD GQQFESSKDV SAHLSSSFGV QDATHETSGP VDESSWSACK MASENSADPT  360
HQMDQKQNGV VCLSAVPISS IPADHLNQSP LPTSGSPGKS WTKETYRCHK CTMSFEEKDN  420
LLLHLLSSHK KSRSARNGAT SGDSVIMKDG KYECQLCHKL FEEKNRYSSH FGNHIKDYVK  480
RVEACGETNR VQRRTPRMQE QIGTERVSSA MPINTEANKK SSLGLPHAKI GSDAIPKTQE  540
RSDGHPVNIP CTEPVAVSKR DEEHVTEYIE KKEIDSGLPN ANVEVVDQGG KINTENNVSK  600
DMTTISSSPL KNGTSETPEE LKVLENENKV SMDSVSSMED RRQETVPLNE VFAPTENNNA  660
TNNESLVNRL FGSPMEEMDA DDGDEVGDNV LISGIEDRCF GLDKGVLNSG TQKISSEGCS  720
LVQFGREEKC ITSDDPTGSK TSVLENESGS ESRMPSSSQV LSPNDNQNKV GGRSQERVSY  780
NSWNGKKAVD FGENVTERMV PEADNSFPAI PSVNQQNCDF DENVKGFSGS KIQNPWRQQV  840
LESNLLSVHQ KSLSPDATVG KISSGTVSNV QLLSESCLDS AVHQQQQVFD SNVLSVHQKS  900
LSPDASAGKI SSGTMRNFQP PSESRSDPAV LNHVEKETPS GGIMPVTSPN QQAFVFNTHE  960
ARGPTFNEPK EYRGFTGLYA GDRDRVDKSG NLSVSGAEEK QNQGESMSYN KSSFGFDNRY  1020
SLQHGGPVTG FEAWANPPSR RVEAVTSDHR GATFFGSAVE ESKRSKESAF GFLSPSVGHQ  1080
QAGGTGYNLD MFYGGAVPDN RRADNVGTLR NEQMTGLYNQ QVPKPREEPM AQSMWRVEQN  1140
VNILPNSGLN YVPSSAAQPP DCFPAFNMVS DKVQNEFYGS NQKPGNAPAV GGGMKSSGGG  1200
GFMEYNFLSA PSSGQGSHIS SFNQQMGQGF ESNWVEKEAL GLFPKMGSSG SSSSGSRQHQ  1260
VTALCVWCGN QFSHDGDFDV GDGSVGYMCF NCKAKFAGQI NFF