PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM80737.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Protein Properties

Length: 495aa MW: 55771.5 Da PI: 9.6167

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM80737.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	43.5	5.8e-14	231	309	2	86
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 +k ++ps+v+ +l lp +f+++ ++k+ + ++tl de+g+++ + rk++ l++GWk+F a++L++gD +vF++++ OWM80737.1 231 VKSMLPSHVSGCFWLGLPVHFCKTS-LPKNDG-MITLVDEEGEEFPTVYLARKTG----LSGGWKGFSVAHELNDGDALVFQVIQ 309 6899****************555.665554.9***********656665....*********************876 PP
2	B3	50.2	4.7e-16	397	485	2	98
EEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 2 fkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 +k+++ps+v+ +l lp +f+++ ++k+ + +tl de+g+++ + rk++ l++GWk+F+ a++L++gD +vF+l++ + l+v ++r OWM80737.1 397 VKTMLPSHVSGGFWLGLPVQFCKTS-LPKNDG-LITLVDEEGEEFPTVYLARKTG----LSGGWKGFAVAHELNDGDALVFQLIK--PTVLKVYIIR 485 699*****************655.555444.9***********656665....*********************997..4445887776 PP

Sequence ? help Back to Top
Protein Sequence Length: 495 aa Download sequence
MSRFEWESNG QLEIQILGKC SEALCLCSAL AQLRLLSPFT FHLLCEKRGE GGGGERRAKV 60 AESWVLEQRK MVAAAAAKVS YEECRRKRLE ENQKRMESLN LPQLAQSLRR SSSLSPSPSP 120 MKQAKPRRTV EKQVVVVRRS GRVANMPAPV YKEDQHSKKV HGTIVSIAEL GIWNLINFIE 180 RLELMSLKHV RIYKRREPIS IVFASNEGRE YAIEKAKELE STLQLQYPTL VKSMLPSHVS 240 GCFWLGLPVH FCKTSLPKND GMITLVDEEG EEFPTVYLAR KTGLSGGWKG FSVAHELNDG 300 DALVFQVIQP TVLKMKQTKP RNVEKQVVVV RRSGRIANMP VPVYKEVVVD RINSPRRIYT 360 RRDPSNIVYA SNEAREYALE QAEELQSTLG PQYPTLVKTM LPSHVSGGFW LGLPVQFCKT 420 SLPKNDGLIT LVDEEGEEFP TVYLARKTGL SGGWKGFAVA HELNDGDALV FQLIKPTVLK 480 VYIIRVSSYD EGEKF

Sequence ? help Back to Top

Protein Sequence Length: 495 aa Download sequence

MSRFEWESNG QLEIQILGKC SEALCLCSAL AQLRLLSPFT FHLLCEKRGE GGGGERRAKV  60
AESWVLEQRK MVAAAAAKVS YEECRRKRLE ENQKRMESLN LPQLAQSLRR SSSLSPSPSP  120
MKQAKPRRTV EKQVVVVRRS GRVANMPAPV YKEDQHSKKV HGTIVSIAEL GIWNLINFIE  180
RLELMSLKHV RIYKRREPIS IVFASNEGRE YAIEKAKELE STLQLQYPTL VKSMLPSHVS  240
GCFWLGLPVH FCKTSLPKND GMITLVDEEG EEFPTVYLAR KTGLSGGWKG FSVAHELNDG  300
DALVFQVIQP TVLKMKQTKP RNVEKQVVVV RRSGRIANMP VPVYKEVVVD RINSPRRIYT  360
RRDPSNIVYA SNEAREYALE QAEELQSTLG PQYPTLVKTM LPSHVSGGFW LGLPVQFCKT  420
SLPKNDGLIT LVDEEGEEFP TVYLARKTGL SGGWKGFAVA HELNDGDALV FQLIKPTVLK  480
VYIIRVSSYD EGEKF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42700.1	2e-56	B3 family protein