PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM80646.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | C2H2 | ||||||||
Protein Properties | Length: 247aa MW: 25792.9 Da PI: 9.0865 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15 | 7.1e-05 | 86 | 108 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp Cgk F++ L H +H OWM80646.1 86 FSCPVCGKAFPSYQALGGHKASH 108 89**********99999998887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MALEALNSPT AAAAPFPFMD EAASARLAEP WAKRKRSKRP HPLTSPTEEE YLALCLVMLA 60 RGGRPSAAPL PPPPALEAAA AAKPSFSCPV CGKAFPSYQA LGGHKASHRV KPSASAGDDQ 120 STSTSAAAAA ATSLSSGKTH ECSICHRSFP SGQALGGHKR CHYEGGSNNS AAATASTASE 180 GTGSTRTHSH SHSQSHSHSR HNFDLNMPAL PELSPKFLVS PGDEEVESPH PSKKPRLTLN 240 IPIKREV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G27730.1 | 6e-39 | C2H2 family protein |