PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM80623.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

GRF

Protein Properties

Length: 505aa MW: 54337.8 Da PI: 7.4649

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM80623.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	76.4	2.9e-24	219	263	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCs+++++++k+CE+H++rgr+rsrk++e OWM80623.1 219 DPEPGRCRRTDGKKWRCSKEAVADQKYCEKHMNRGRHRSRKPVEG 263 79****************************************985 PP
2	QLQ	54.6	3.2e-19	134	170	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++FT++Q ++L++Q+l+yKy+++n+PvP +Ll +i+k OWM80623.1 134 GPFTPSQYMELEHQALIYKYIVSNVPVPLNLLIPIKK 170 59*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence
MDLGAVGFGG WGVGSDPEAK HRLYGHGSLF KQGRAACDGP EDDLRSSKVA KAEDLLSAPK 60 KAGRDSDGAS LLSNGSSPVF FSAGNHHHHQ QQQQQQQHML CFSSSKSDAP SPHLSHSSSS 120 LYGANVNGAL FSRGPFTPSQ YMELEHQALI YKYIVSNVPV PLNLLIPIKK AFDSAVLACH 180 SSGLFRPNAC ELSPELRDNQ SFLMGKVIVI EVYLTISTDP EPGRCRRTDG KKWRCSKEAV 240 ADQKYCEKHM NRGRHRSRKP VEGQTGHSVS GATTTAPSTN IPAASALVGP GSGVSNSMTL 300 NRMLMNEGNV ANRMKDPGDL YLLSPAVELK SKENSFLISS KQQFLEMESH HSVHQFMDDW 360 PENHSADPAI AGAGLDLQSD GTQLSIAIPT MSSPENKKSS SFFQFGSLQE MDKVEMIDLG 420 VGVGNKQASY WVPISRENSI GGPLGEALKS TNNSSMGCKT LWVSTSPSLQ SSPTGVLQRT 480 TFVSLSNSSA GSSPRADNSK NLEEA

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence

MDLGAVGFGG WGVGSDPEAK HRLYGHGSLF KQGRAACDGP EDDLRSSKVA KAEDLLSAPK  60
KAGRDSDGAS LLSNGSSPVF FSAGNHHHHQ QQQQQQQHML CFSSSKSDAP SPHLSHSSSS  120
LYGANVNGAL FSRGPFTPSQ YMELEHQALI YKYIVSNVPV PLNLLIPIKK AFDSAVLACH  180
SSGLFRPNAC ELSPELRDNQ SFLMGKVIVI EVYLTISTDP EPGRCRRTDG KKWRCSKEAV  240
ADQKYCEKHM NRGRHRSRKP VEGQTGHSVS GATTTAPSTN IPAASALVGP GSGVSNSMTL  300
NRMLMNEGNV ANRMKDPGDL YLLSPAVELK SKENSFLISS KQQFLEMESH HSVHQFMDDW  360
PENHSADPAI AGAGLDLQSD GTQLSIAIPT MSSPENKKSS SFFQFGSLQE MDKVEMIDLG  420
VGVGNKQASY WVPISRENSI GGPLGEALKS TNNSSMGCKT LWVSTSPSLQ SSPTGVLQRT  480
TFVSLSNSSA GSSPRADNSK NLEEA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	2e-55	GRF family protein