PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM79898.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MYB | ||||||||
Protein Properties | Length: 290aa MW: 32438.2 Da PI: 5.2523 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 22.4 | 2.9e-07 | 18 | 53 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W+ Ede+l ++v+++G ++R++k+c++rw++yl OWM79898.1 18 RGVWSSKEDEILTNYVNLHG------------LNRCAKSCRLRWLNYL 53 899*****************............47************97 PP | |||||||
2 | Myb_DNA-binding | 47.7 | 3.5e-15 | 59 | 103 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ +++E+el+++++ +lG++ W++Ia +++ gRt++++k++w++ OWM79898.1 59 RGNISEDEEELIIRLHCLLGNR-WALIAGRLP-GRTDNEIKNYWNTI 103 7899******************.*********.***********986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence |
MGRRRSHCCP KESTNVNRGV WSSKEDEILT NYVNLHGLNR CAKSCRLRWL NYLKPGIKRG 60 NISEDEEELI IRLHCLLGNR WALIAGRLPG RTDNEIKNYW NTILVKKSHK HPRTALRPKS 120 VPPNSLEEHF SPNNEDDAMN FDNNHSILNA RHEALIGLAD QADDGEKQKY GPGSGPGPGP 180 FTFSPTVAPE GTGNDDLGFM MDESYGSESL SGNLNEVVPE DFLNLSPSST SPGSGSLFSG 240 DDQAMMINKF ENEINNCSNT TIREPTLDVE LKKLASFLDL EDEWRELLKI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35550.1 | 2e-43 | MYB family protein |