PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM79846.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 338aa    MW: 37495.3 Da    PI: 6.1821
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM79846.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH278.2e-09169212855
                 HHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   8 rErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 r r+RR++i +++  L++l+P+     ++K++ a+ Le++ +YI+ Lq
  OWM79846.1 169 RQRQRRRDISEKMRCLKKLMPTT----NRKMDNATLLEEVHKYIRFLQ 212
                 78********************9....9*******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MTADGSDADE VAARFDAMFA GVSLQSLLLQ QIPHLHPVVP DGDDNCPQLP STLLPPPLVP  60
SDQYSPALSH GKTTDEGSFP ISSSTLVLET PKPEPLDEPL DEPVTAELQF PPVLFHHLDC  120
FQPAQPPSDS LSAATGSHIP WQHELPNNTS PTPVPASRRR AGSRRDLVRQ RQRRRDISEK  180
MRCLKKLMPT TNRKMDNATL LEEVHKYIRF LQAHVSALLS IPAHVHHGPP PPPPPPCYQQ  240
PALPHQADNY SYADAAMIGS DGCRSVLGLN QRQQTVLYSR GQCVVSVEQL EMAETAIMAH  300
HHYQQQQQQQ QQQQEQSMTM VMASVMFDAY SSSVSNFY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22100.12e-10bHLH family protein