PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM79670.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

GRF

Protein Properties

Length: 442aa MW: 47684.7 Da PI: 9.1217

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM79670.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	75.9	4.1e-24	151	195	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr + +++k+CErHl+rgr rsrk++e OWM79670.1 151 DPEPGRCRRTDGKKWRCSRAAAPDQKYCERHLNRGRPRSRKPVEV 195 79****************************************985 PP
2	QLQ	57.8	3.3e-20	91	125	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FT aQ+ +L++Q+++yKy++a++PvPp+Ll++++ OWM79670.1 91 PFTQAQWRELERQAMIYKYMVASAPVPPDLLFPLS 125 9*******************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence
MMVHHDNHHR PFTSPPSSSS KYGGDGDVVP AGTNGRFFSS SSGAAVVNGR LGLLGGGDRR 60 APHHHHRHHH DPFESFIPSA SSSSGMWMGY PFTQAQWREL ERQAMIYKYM VASAPVPPDL 120 LFPLSSVPDS HYSSSLAGGS YSLRFGNAGG DPEPGRCRRT DGKKWRCSRA AAPDQKYCER 180 HLNRGRPRSR KPVEVSASPN KKTRHCHGSN APLPSSSPAA AGNNATPSQH YHNNQAPQMF 240 LRGNGGLEPV SVPHSQEARG LEWLMIRESH IAEETLNLNS NYTSTKSNQF NEYLFPLGNS 300 DVISVAEPQS STPRGFIDAW SDTNSKKSCS VSPHDEKLSL SEEMGHIHMG LGVSHWVQAG 360 DVKSSSWISS APGGPLGEVF RPTINSVSSP SSLNSGSPLI SSPSAVLQRK MTSISDSSGG 420 SSPTPGSSMG RSEINVNWFN PN

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence

MMVHHDNHHR PFTSPPSSSS KYGGDGDVVP AGTNGRFFSS SSGAAVVNGR LGLLGGGDRR  60
APHHHHRHHH DPFESFIPSA SSSSGMWMGY PFTQAQWREL ERQAMIYKYM VASAPVPPDL  120
LFPLSSVPDS HYSSSLAGGS YSLRFGNAGG DPEPGRCRRT DGKKWRCSRA AAPDQKYCER  180
HLNRGRPRSR KPVEVSASPN KKTRHCHGSN APLPSSSPAA AGNNATPSQH YHNNQAPQMF  240
LRGNGGLEPV SVPHSQEARG LEWLMIRESH IAEETLNLNS NYTSTKSNQF NEYLFPLGNS  300
DVISVAEPQS STPRGFIDAW SDTNSKKSCS VSPHDEKLSL SEEMGHIHMG LGVSHWVQAG  360
DVKSSSWISS APGGPLGEVF RPTINSVSSP SSLNSGSPLI SSPSAVLQRK MTSISDSSGG  420
SSPTPGSSMG RSEINVNWFN PN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53660.1	1e-37	GRF family protein