PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM79458.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NAC

Protein Properties

Length: 344aa MW: 39901.8 Da PI: 6.9016

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM79458.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	180.6	3.9e-56	7	136	1	129
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 +ppGfrFhPtdeelv++yL+kk+++++++l +vik+vd+yk+ePwdL++ +++a e++ewyfFs++dkky+tg+r+nrat++g+Wkatg+dk+++s k OWM79458.1 7 VPPGFRFHPTDEELVDYYLRKKINSRRIDL-DVIKDVDLYKIEPWDLQElcRISAeEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYS-K 103 69**************************.9***********954555442566**********************************.8 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrle 129 + l+g++ktLvfykgrap+g+k+dW+mheyrle OWM79458.1 104 HDLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLE 136 899**************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 344 aa Download sequence
MNAFSRVPPG FRFHPTDEEL VDYYLRKKIN SRRIDLDVIK DVDLYKIEPW DLQELCRISA 60 EEQNEWYFFS HKDKKYPTGT RTNRATAAGF WKATGRDKAI YSKHDLIGMR KTLVFYKGRA 120 PNGQKSDWIM HEYRLETDEN GTPQARKTLN QMSYICWVVC RVFKKRIPTV RKMSEHGSPC 180 WYDDQSPFMP DLDSPNQSSN PSNLANYHHL PYACKKELDL HQYQLPQEHF MQLPLLENPK 240 LLLAPFGLDM NQSTALQSSS SLTQEQNLHS LFGNNNNNNH EQEVVDQVTD WRVLDKFVAS 300 QLSQEDAPNV NTNGAAARQL GKQDMITDDG SLQTSTSCQM DLWK

Sequence ? help Back to Top

Protein Sequence Length: 344 aa Download sequence

MNAFSRVPPG FRFHPTDEEL VDYYLRKKIN SRRIDLDVIK DVDLYKIEPW DLQELCRISA  60
EEQNEWYFFS HKDKKYPTGT RTNRATAAGF WKATGRDKAI YSKHDLIGMR KTLVFYKGRA  120
PNGQKSDWIM HEYRLETDEN GTPQARKTLN QMSYICWVVC RVFKKRIPTV RKMSEHGSPC  180
WYDDQSPFMP DLDSPNQSSN PSNLANYHHL PYACKKELDL HQYQLPQEHF MQLPLLENPK  240
LLLAPFGLDM NQSTALQSSS SLTQEQNLHS LFGNNNNNNH EQEVVDQVTD WRVLDKFVAS  300
QLSQEDAPNV NTNGAAARQL GKQDMITDDG SLQTSTSCQM DLWK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G12260.1	1e-110	NAC family protein