PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM79444.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

C2H2

Protein Properties

Length: 327aa MW: 36362.9 Da PI: 9.4678

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM79444.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	12.5	0.00043	7	28	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C++C++sF + + H+r+H OWM79444.1 7 VCKICDRSFANGKAMGGHMRSH 28 6*******************99 PP
2	zf-C2H2	12.2	0.00055	249	271	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kCp C+k+F + L H ++H OWM79444.1 249 FKCPFCDKVFESGQGLGGHKKVH 271 89*********999999888887 PP

Sequence ? help Back to Top
Protein Sequence Length: 327 aa Download sequence
MEANTRVCKI CDRSFANGKA MGGHMRSHLA KFQLPPAPKP QPEPSQSPAT VQSANSELSS 60 IAISDPTVHD DRESDTESRK IIMNPDKTTG LQLKRSKRGR RLASYKPMPV DAPEYVSSES 120 TSQLALSDEE VARCLLLLSI GNSSRGPIAK KEPKEAVDET ELSEEEEEEK GESFCAKWKQ 180 TRATRSKFKC KVCKKIFRSY QALGGHRASH GHGTTSAKDT RRINHQRDSN NKKADQRDPD 240 RESNNRKIFK CPFCDKVFES GQGLGGHKKV HAFDAAKKKI KISNSDCDDT TAQKLCRRER 300 LFFDLNLPAA TEDEVISQPQ LAKSSSG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60580.1	6e-32	C2H2 family protein