PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM79362.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

bHLH

Protein Properties

Length: 392aa MW: 43270.2 Da PI: 5.1151

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM79362.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.8	6.1e-11	199	251	1	54
CHHHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-.STCHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPk.askapskK.lsKaeiLekAveYIksL 54 +++ hn+ Er RR ++N ++ L llP+ + +skK s +++ k veYI +L OWM79362.1 199 KKQDHNAKERVRRMKLNASYLALGALLPQsR---RSKKrWSAPMVVDKMVEYIPEL 251 6899***********************66...88888************988 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MSSLTKISNP TEETSPYLDV SLEDLDDLWP LLDDQENLVA TQPESSNIET YQNDGSFLLS 60 PHHQTANADV NNNSCLLPRE HGSTPVPTMN NDPIVGQQLE GQEQDTVPLT GSGIMAQGLL 120 YINTPVEDAL CNEENAAFAK ISHADQKGKG KAVGGIQIDS PESAETGHRL SRRTRTGRKA 180 ADKQHQLQTD GKDGSTVDKK QDHNAKERVR RMKLNASYLA LGALLPQSRR SKKRWSAPMV 240 VDKMVEYIPE LKREIEELTS EKEKMLDQKR EVVDNRICRT SETTSDSTDQ LECCPITVSV 300 HEVKSGELII QICTKKKKNR KEGEEDNSVF SSMMSNFEAK GLSISSASTL NVGGDRICYH 360 LHVQMNGSSD GPDYTAILKE NVVSWLTGPS SS

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MSSLTKISNP TEETSPYLDV SLEDLDDLWP LLDDQENLVA TQPESSNIET YQNDGSFLLS  60
PHHQTANADV NNNSCLLPRE HGSTPVPTMN NDPIVGQQLE GQEQDTVPLT GSGIMAQGLL  120
YINTPVEDAL CNEENAAFAK ISHADQKGKG KAVGGIQIDS PESAETGHRL SRRTRTGRKA  180
ADKQHQLQTD GKDGSTVDKK QDHNAKERVR RMKLNASYLA LGALLPQSRR SKKRWSAPMV  240
VDKMVEYIPE LKREIEELTS EKEKMLDQKR EVVDNRICRT SETTSDSTDQ LECCPITVSV  300
HEVKSGELII QICTKKKKNR KEGEEDNSVF SSMMSNFEAK GLSISSASTL NVGGDRICYH  360
LHVQMNGSSD GPDYTAILKE NVVSWLTGPS SS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G71200.1	9e-32	bHLH family protein