PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM79232.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Protein Properties

Length: 436aa MW: 49403.9 Da PI: 5.5565

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM79232.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.3	1.4e-18	85	174	1	98
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 f+k++++s+v + +l lp f+++h+ + t++lede+g+++ev +i++k+ l++GWk F a +L egD+v+F+l++ +f +v ++r OWM79232.1 85 FLKTMVRSNVATGFWLHLPMGFCKAHMPR--HNSTVILEDENGEKYEVHYIMDKTA----LSAGWKLFTTARKLVEGDVVIFQLVEPCRF--KVYIVR 174 89**********************744..4559***********888887....*********************9987888..787776 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MDSLPDPNLN MALVVTENAE PPQAEQDFSS ILEPVSSPTP RESKRQKRLM VDDLYHYDHV 60 GVKSSTMERA EEFTRSLTPP GLQTFLKTMV RSNVATGFWL HLPMGFCKAH MPRHNSTVIL 120 EDENGEKYEV HYIMDKTALS AGWKLFTTAR KLVEGDVVIF QLVEPCRFKV YIVRADEKSV 180 ADGMPELDAS AGQIAPANDA KRKVVQHRVR RRKSKPSRNR SLVVAETQIT SAQDNESKEV 240 SEDPSLVTNE GTRILANCSP DFEEAKSTGN FTILVNSTAI DSELSETQRT KYYELCMTQN 300 SYLHGNLLKS ISPKLAAEII SETVNIAGLI RACDISTSEE EYSVWDKTLE GFEMLGMRVG 360 FLRTRLGRLR ELASEFQKYK NVETQREIAE QELRAIREEL SQLKELRSRL DSEIEALKAS 420 VERHEHIFQQ EASAAW

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MDSLPDPNLN MALVVTENAE PPQAEQDFSS ILEPVSSPTP RESKRQKRLM VDDLYHYDHV  60
GVKSSTMERA EEFTRSLTPP GLQTFLKTMV RSNVATGFWL HLPMGFCKAH MPRHNSTVIL  120
EDENGEKYEV HYIMDKTALS AGWKLFTTAR KLVEGDVVIF QLVEPCRFKV YIVRADEKSV  180
ADGMPELDAS AGQIAPANDA KRKVVQHRVR RRKSKPSRNR SLVVAETQIT SAQDNESKEV  240
SEDPSLVTNE GTRILANCSP DFEEAKSTGN FTILVNSTAI DSELSETQRT KYYELCMTQN  300
SYLHGNLLKS ISPKLAAEII SETVNIAGLI RACDISTSEE EYSVWDKTLE GFEMLGMRVG  360
FLRTRLGRLR ELASEFQKYK NVETQREIAE QELRAIREEL SQLKELRSRL DSEIEALKAS  420
VERHEHIFQQ EASAAW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	210	215	RRRKSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G42700.1	7e-28	B3 family protein