PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM79159.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family MYB_related
Protein Properties Length: 329aa    MW: 36497 Da    PI: 8.4446
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM79159.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding35.42.4e-11555146
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqk 46
                     +++WT+eE+  l+ +v ++G g W+tI +          R+  ++k++w++
       OWM79159.1  5 KQKWTAEEEAALKAGVLKHGAGKWRTILKDPEfsgvlYLRSNVDLKDKWRN 55
                     79***********************************88***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MGAPKQKWTA EEEAALKAGV LKHGAGKWRT ILKDPEFSGV LYLRSNVDLK DKWRNMSVMV  60
NGWNSREKTR LPVKRVSHVT RLEDSSASIR TVAQSDEEAA DAKDLAISAD VVHIDGPKRS  120
IVRLDNLILE AITALKEPGG SNRTTIASFI EEQYWAPPNF ERLLSAKLKH LASVGKLVKV  180
KRKYSIPPAP GFMDRRRATP MLLSDRQQKY PPKVEEEDID MLTREQIDLE LAKMRTMTPR  240
EAAAAAARAV AEAEAAIAAA EEAAREAEAA EADAAAAQAF AEAAMKTLKG RNPPKMVLAY  300
YPCIDLVMTT LCGDQDLALF TWFCWLHRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G49950.12e-93MYB_related family protein