PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM79028.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family Dof
Protein Properties Length: 285aa    MW: 30651.2 Da    PI: 6.2213
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM79028.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof115.52.2e-361468660
      zf-Dof  6 lkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkk 60
                 +cprC s+ntkfCyynnysl+qPryfCk+CrryWtkGG+lrnvP+Ggg+rkn++
  OWM79028.1 14 PSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPMGGGCRKNRR 68
                58***************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MERAGWKPNV EMSPSCPRCG SSNTKFCYYN NYSLTQPRYF CKGCRRYWTK GGSLRNVPMG  60
GGCRKNRRGR SIRLSTDIMS SKSTGFRGLS NHPLGLSHGS SSSTGPPNID LALVYANFLN  120
PQPPGSENSS GSEPQEPTSS NGGLSMVPSV LSGMTNGPDS SIGLLEAGNG CIFGWESLSD  180
LFVDNHLGKG GNTPIFDHPT IIDSLQASHH STVIQQCGTD DMSYYVLPPL PNEDIVLSQE  240
MTAPWSVTHP LVVEDHSLQA PELPVLGPDH QAQADQDPNL LITGS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G52440.12e-41Dof family protein