PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM78844.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MYB | ||||||||
Protein Properties | Length: 314aa MW: 33926.2 Da PI: 9.852 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 53.9 | 4.2e-17 | 70 | 115 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ed +l+++v+q+G+ +W++Ia+++ gR++k+c++rw++ OWM78844.1 70 RGHWRPAEDAKLKELVAQFGPQNWNLIAEHLD-GRSGKSCRLRWFNQ 115 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 57.1 | 4e-18 | 122 | 165 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 ++++T+eE+e+l+ a++++G++ W+ Iar ++ gRt++ +k++w+ OWM78844.1 122 KKAFTEEEEEKLLAAHRLYGNK-WAMIARLFP-GRTDNAVKNHWHV 165 679*******************.*********.***********85 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 314 aa Download sequence |
MSLHRPQTTV SGFNGLQEMN FLPPPEISLS PGTGGRREKE STGGLLMGLE AVNTAVKFSG 60 VQSHTKLCAR GHWRPAEDAK LKELVAQFGP QNWNLIAEHL DGRSGKSCRL RWFNQLDPRI 120 NKKAFTEEEE EKLLAAHRLY GNKWAMIARL FPGRTDNAVK NHWHVIVARK RREQQHSSVS 180 YRRRLSKPGH LAVSPKAGQD TARACSDSTV TSNVEEPGGG STSTGLSLTP SSGKAPLLTL 240 SSPNAGSPGS NGANSKVMEN VSSYKSPAGP VATSDCSNSE VSAAESVANI SMPADQYKMN 300 VPCFIDFLRV GSNC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G17800.1 | 1e-69 | MYB family protein |