PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM78843.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

Dof

Protein Properties

Length: 453aa MW: 49105.6 Da PI: 5.7166

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM78843.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	122.9	1.1e-38	94	153	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 ++k+l+cprC+s +tkfCy+nny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+ OWM78843.1 94 PDKILPCPRCNSFDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKQF 153 7899*****************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MSPQNMIPGI KLFGRKIPVP EGQIPAKPDA GFQIPTESQV TEARGANSNI EAVQFGKSAD 60 VESGQEDMAQ VSPDNEEDKT ETTQHEEEKT FKKPDKILPC PRCNSFDTKF CYFNNYNVNQ 120 PRHFCKNCQR YWTAGGTMRN VPVGAGRRKN KQFASSQYRQ AVLSVNGMAA PTSGLETPNS 180 ANPRFLPPGE FASPLTPPEV RGSAVLKFGP EGTLSESMDS VLNLRDRCRS GERGPVSFSE 240 SREEPSSASE LESNSSGSCD SNHNPPQQIP ALFFPYHSSW QNLATPLGAY PSHFSSKQVY 300 DRNSVQWGSP PMVAIPSVCA QPTIPLQIVP TSYLGYVPFA VLNGCLSPSS STVTNGGCSG 360 SGSPSLGKHL RDGDVERSES DVLVPKTLRI DDPNEASRSP IWATFGIKPY EKVSSSMVNG 420 KVECQGNNSE DAADIMEANP AALSRSHTFQ EST

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MSPQNMIPGI KLFGRKIPVP EGQIPAKPDA GFQIPTESQV TEARGANSNI EAVQFGKSAD  60
VESGQEDMAQ VSPDNEEDKT ETTQHEEEKT FKKPDKILPC PRCNSFDTKF CYFNNYNVNQ  120
PRHFCKNCQR YWTAGGTMRN VPVGAGRRKN KQFASSQYRQ AVLSVNGMAA PTSGLETPNS  180
ANPRFLPPGE FASPLTPPEV RGSAVLKFGP EGTLSESMDS VLNLRDRCRS GERGPVSFSE  240
SREEPSSASE LESNSSGSCD SNHNPPQQIP ALFFPYHSSW QNLATPLGAY PSHFSSKQVY  300
DRNSVQWGSP PMVAIPSVCA QPTIPLQIVP TSYLGYVPFA VLNGCLSPSS STVTNGGCSG  360
SGSPSLGKHL RDGDVERSES DVLVPKTLRI DDPNEASRSP IWATFGIKPY EKVSSSMVNG  420
KVECQGNNSE DAADIMEANP AALSRSHTFQ EST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	7e-40	Dof family protein