PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM78778.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family NAC
Protein Properties Length: 302aa    MW: 34953.4 Da    PI: 8.4067
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM78778.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1591.9e-49221482128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kge 98 
                  pGfrF Ptdeel+ +yL++kvegk l++++ ik++diyk++PwdLp  +++++kewyfF+ r +ky+++ r+nr+t sg+Wkatg dk+v+s+  ++e
  OWM78778.1  22 LPGFRFYPTDEELLGFYLRRKVEGKLLRVDQLIKHIDIYKYNPWDLP--MNGGDKEWYFFCMRGRKYKNSVRPNRVTGSGFWKATGIDKPVYSTkeSHE 118
                 69***************************999***************..78899***************************************855555 PP

         NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                  vglkk+Lv+y+g+a kg+ktdW+mhe+rl
  OWM78778.1 119 CVGLKKSLVYYRGTAGKGTKTDWMMHEFRL 148
                 6***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MERGRSSLDV SNKKDEELEV VLPGFRFYPT DEELLGFYLR RKVEGKLLRV DQLIKHIDIY  60
KYNPWDLPMN GGDKEWYFFC MRGRKYKNSV RPNRVTGSGF WKATGIDKPV YSTKESHECV  120
GLKKSLVYYR GTAGKGTKTD WMMHEFRLPP TGKSGHLPSK RIIAEEEAEV WTLCRIFKRT  180
PVPSRKYIPE GKDKKPDAIK DTMIISTTMD SSSKSCSFDS DYGEHYLSFG DSVINQQKER  240
KPMTAGGQLY CWSGNYSNSE PYKSFWDVNE DQDFFADQEL DELRSVAHRA ISSSQVYGYD  300
FS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.11e-80NAC family protein