PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM78692.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family TCP
Protein Properties Length: 300aa    MW: 32456.8 Da    PI: 5.6066
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM78692.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP1159.7e-3620104266
         TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt....................s 66 
                 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++akpai++l+++                    +
  OWM78692.1  20 TGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIENAKPAIDKLVELpqwqnipdsaaaagggdddnG 104
                 79**************************************************************666444433333333222220 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MRGMGGEIVQ VQGGHIVRST GRKDRHSKVY TAKGPRDRRV RLSAHTAIQF YDVQDRLGYD  60
RPSKAVDWLI ENAKPAIDKL VELPQWQNIP DSAAAAGGGD DDNGDVSMME IRTAADSEEL  120
NNLESSGFVP SQQPLDSVSN SMMDMISQKD LGLSLHSFQQ APKRHEQTAP LFGSSAGPVG  180
FGFEAGNNYP RSAANWSNDT CTENRDDFSF NLQLPLQQPT SVGLGGYNFP QRGPLQSSFS  240
TAFQQSFSFG GRFVPDGFPG MGIPGQVHDE EGSDNVGLQK PPSSSAYASL SSSGHSLKRT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G15030.26e-45TCP family protein