PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM78672.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

G2-like

Protein Properties

Length: 462aa MW: 49137.6 Da PI: 4.4548

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM78672.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	74.5	1.5e-23	182	229	4	52
G2-like 4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQk 52 ++WtpeLH++Fv+aveqL G +kA+P++ile+m++++Lt+++++SHLQk OWM78672.1 182 VDWTPELHRKFVQAVEQL-GLDKAVPSKILEIMGMDCLTRHNIASHLQK 229 78**************.***************************9 PP
2	Myb_DNA-binding	34.2	6e-11	183	229	3	46
SS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqk 46 WT+e++ ++v+av+qlG + +++I + mg +t+ ++ s++qk OWM78672.1 183 DWTPELHRKFVQAVEQLGLDkaVPSKILEIMGmDCLTRHNIASHLQK 229 6******************************888********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MLALSPPRSR EDGKDTLDFP AGSADHHQFI DFGDGNLLDC IDFDDLFTDI EVDGAEFLPD 60 LEMVDPDNIG EFSPTSGGEE SEVMNVSEVL DRTENGASVN DENEEEDKSA SERDEPGKVD 120 QSTAKGTDKG GRRVGRKSSS SVQSKNNPPQ GKRKVKGSMY FMNYCIAIRE YMDTNMEPVA 180 TVDWTPELHR KFVQAVEQLG LDKAVPSKIL EIMGMDCLTR HNIASHLQKT NCSWVAAAEI 240 PVPSEASAGS GSGGSKLESP GADDVRWRKD GAESIADQWA YHGFPSSCDP TACAATVQAF 300 ARVGPSNRRS GVAKTSCPPA PSSTAFNARL ASSWPTLFSD TTAGATYGSQ CILASSPPPA 360 GTPYLPQPRA FTGLMTAPPV SGIPPKAMYK EDPGIGVPSG QSGPQPPPDF HPSGETIDAA 420 IGDALKKPWQ PLPLGLKPPS LDGVLTELHR EGIPDIPPSS PS

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MLALSPPRSR EDGKDTLDFP AGSADHHQFI DFGDGNLLDC IDFDDLFTDI EVDGAEFLPD  60
LEMVDPDNIG EFSPTSGGEE SEVMNVSEVL DRTENGASVN DENEEEDKSA SERDEPGKVD  120
QSTAKGTDKG GRRVGRKSSS SVQSKNNPPQ GKRKVKGSMY FMNYCIAIRE YMDTNMEPVA  180
TVDWTPELHR KFVQAVEQLG LDKAVPSKIL EIMGMDCLTR HNIASHLQKT NCSWVAAAEI  240
PVPSEASAGS GSGGSKLESP GADDVRWRKD GAESIADQWA YHGFPSSCDP TACAATVQAF  300
ARVGPSNRRS GVAKTSCPPA PSSTAFNARL ASSWPTLFSD TTAGATYGSQ CILASSPPPA  360
GTPYLPQPRA FTGLMTAPPV SGIPPKAMYK EDPGIGVPSG QSGPQPPPDF HPSGETIDAA  420
IGDALKKPWQ PLPLGLKPPS LDGVLTELHR EGIPDIPPSS PS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G20570.2	2e-24	G2-like family protein