PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM78658.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | bHLH | ||||||||
Protein Properties | Length: 238aa MW: 27188.5 Da PI: 9.9834 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 22.1 | 2.7e-07 | 23 | 78 | 2 | 55 |
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-..STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskK..lsKaeiLekAveYIksLq 55 r+ + +E++RR++++ ++ L +l+P +++++++K s + +A +YIk L+ OWM78658.1 23 RVERKTMEKNRRNKMKYLYSMLNSLVPRNYNNQDPKeaKSLPDQIDEAAKYIKRLE 78 677889**********************886777773366679**********995 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 238 aa Download sequence |
MDQRPGKRSG PPQAAGASSS STRVERKTME KNRRNKMKYL YSMLNSLVPR NYNNQDPKEA 60 KSLPDQIDEA AKYIKRLEAR VNEAQEKRNT LAGRKRLHSS TAPDSSASKS AVQTFKSPKM 120 DIQVHWPALE VTLISEMCNH FIFLDAVRVL REERAEVLNV NFSVVGSSVY HLIRAEIGEG 180 TEAATITQRM RNLVNGSSSN DSHQSQQQLQ QQQLHHPWDF QISPNIWEFD MFHAWHST |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G20970.1 | 1e-25 | bHLH family protein |