PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID OWM77628.1
Organism
Punica granatum
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
Family bHLH
Protein Properties Length: 85aa    MW: 9943.47 Da    PI: 11.0338
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
OWM77628.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH19.81.4e-064568528
                HHHHHHHHHHHHHHHHHHHHCTSC CS
         HLH  5 hnerErrRRdriNsafeeLrellP 28
                +  +Er+RR+++ +++ +Lr+l+P
  OWM77628.1 45 NLTAERKRREKLSQRLLTLRSLIP 68
                5579******************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 85 aa     Download sequence    
MEFSHCLGTK LEELCIAEEG GGRFSGRMGR RRYRDGDDTQ YKSKNLTAER KRREKLSQRL  60
LTLRSLIPII TNAINFPRPK ITRFN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14954ERKRRE
25055RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G21330.13e-08bHLH family protein