PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM77618.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | C2H2 | ||||||||
Protein Properties | Length: 99aa MW: 11864.3 Da PI: 5.9062 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.5 | 0.00046 | 26 | 41 | 1 | 16 |
EEETTTTEEESSHHHH CS zf-C2H2 1 ykCpdCgksFsrksnL 16 ++C++C + F+++ L OWM77618.1 26 FECHYCYRNFPTSQAL 41 89*********99766 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 99 aa Download sequence |
MVENMNSSEE VKDVNNTENG ESRRRFECHY CYRNFPTSQA LGGYQIVHNR ECQNAKRTHL 60 QSTMVHDSDP SLLLFHFIYV HFRLIEEEEE KDVRVMVLW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G41940.1 | 2e-15 | C2H2 family protein |