PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

OWM77424.1

Organism

Punica granatum

Taxonomic ID

22663

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica

Family

NAC

Protein Properties

Length: 310aa MW: 35632.9 Da PI: 7.4115

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
OWM77424.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	109.1	5.3e-34	61	202	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklelee....vikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra......tk.sgyWk 84 lp+G++F+Ptd+e++ eyL++kv ++ ++l+ +ik+++ i+ ++P++Lp v+ + + +fF++ +k+y+tg+rk+r t+ + +W+ OWM77424.1 61 LPAGVKFDPTDQEIM-EYLEAKVMEDGIRLHAlideFIKTLEgdngICCAHPEKLP-GVRRDGQIRHFFHRPSKAYTTGTRKRRRvhmgknTEgETRWH 157 799********99.*******6664433333333324455******.566677778**************7466665224778 PP NAM 85 atgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128 +tgk++++++ +g+++g kk+Lv+y gr++k+ekt+Wvmh+y+l OWM77424.1 158 KTGKTRPIIA-GGKVKGFKKILVLYtnYGRQRKPEKTNWVMHQYHL 202 ********.9*********66589************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence
MNTWCSTNDS SEVEEIADKI TTSIYHESGE PDYSGTIITC LSCGHPIELY NQGQIHELQG 60 LPAGVKFDPT DQEIMEYLEA KVMEDGIRLH ALIDEFIKTL EGDNGICCAH PEKLPGVRRD 120 GQIRHFFHRP SKAYTTGTRK RRRVHMGKNT EGETRWHKTG KTRPIIAGGK VKGFKKILVL 180 YTNYGRQRKP EKTNWVMHQY HLGDNEEEKD GELVVSKVLY QTQPKQCGQK RKKEMETTTN 240 HSRDQSLHGK RLPEDRYHYN NYTPVQGGRE SISNDQISPA QLRLIPNSII RQEDESSFAD 300 QFTKMQEENS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	139	143	RKRRR
2	140	144	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28500.1	1e-111	NAC family protein