PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | OWM77295.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Myrtales; Lythraceae; Punica
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Family | MYB | ||||||||
Protein Properties | Length: 344aa MW: 38858.3 Da PI: 5.3382 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 56.3 | 7.3e-18 | 15 | 62 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+eEd +l d+vk +G g+W+ +++ g++R++k+c++rw++yl OWM77295.1 15 RGAWTAEEDRILTDYVKAHGEGRWANLPKRAGLKRCGKSCRLRWLNYL 62 89********************************************97 PP | |||||||
2 | Myb_DNA-binding | 46.3 | 9.8e-15 | 68 | 113 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ +++E+el+ +++k+lG++ W +Ia +++ gR+++++k++w+++l OWM77295.1 68 RGNISPDEEELIMRLHKLLGNR-WCLIAGRLP-GRSDNEIKNYWNSFL 113 7899******************.*********.************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 344 aa Download sequence |
MGRRPCCSKE EGLNRGAWTA EEDRILTDYV KAHGEGRWAN LPKRAGLKRC GKSCRLRWLN 60 YLRPGIKRGN ISPDEEELIM RLHKLLGNRW CLIAGRLPGR SDNEIKNYWN SFLSKRARKD 120 DIPRRKPPEL QRYSDRLEDR ANLQPKQNVD TSGNLSSTDQ PSPREEKPSM SLGAFWAAAL 180 KCSEGATDPE PRVSRQQDQH STCFGITNKD TRPHPPIDGD ILPKESENVE VANNGSAFKL 240 LSCSHRKDDV AENTEEDPVM DFDIGDVCLS DLLDADLTGS SSSSSPPFSD PQPAISSEEL 300 MLQDWNLIID SHQADNVWAP NHIVQYSSSS YIFDSPEVEL LWER |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G35550.1 | 3e-58 | MYB family protein |